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    mmadhcb metabolism of cobalamin associated Db [ Cyclopterus lumpus (lumpfish) ]

    Gene ID: 117750820, updated on 19-Mar-2024

    Summary

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    Gene symbol
    mmadhcb
    Gene description
    metabolism of cobalamin associated Db
    See related
    Ensembl:ENSCLMG00005004153
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cyclopterus lumpus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Cottales; Cyclopteridae; Cyclopterus
    Orthologs
    human zebrafish all
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    Genomic context

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    See mmadhcb in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current fCycLum1.pri (GCF_009769545.1) 21 NC_046986.1 (25159304..25167210, complement)

    Chromosome 21 - NC_046986.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 10 member 2 Neighboring gene kelch domain containing 3-like Neighboring gene N-myc (and STAT) interactor Neighboring gene integrin, beta 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_046986.1 Chromosome 21 Reference fCycLum1.pri

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cobalamin metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    metabolism of cobalamin associated Db

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cyclopterus lumpus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fCycLum1.pri

    Genomic

    1. NC_046986.1 Reference fCycLum1.pri

      Range
      25159304..25167210 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034562201.1 → XP_034418092.1  metabolism of cobalamin associated Db isoform X1

      UniProtKB/TrEMBL
      A0A8C2WQR4
      Conserved Domains (1) summary
      pfam10229
      Location:24 → 289
      MMADHC; Methylmalonic aciduria and homocystinuria type D protein

    2. XM_034562202.1 → XP_034418093.1  metabolism of cobalamin associated Db isoform X1

      UniProtKB/TrEMBL
      A0A8C2WQR4
      Conserved Domains (1) summary
      pfam10229
      Location:24 → 289
      MMADHC; Methylmalonic aciduria and homocystinuria type D protein

    3. XM_034562200.1 → XP_034418091.1  metabolism of cobalamin associated Db isoform X1

      UniProtKB/TrEMBL
      A0A8C2WQR4
      Related
      ENSCLMP00005007660.1, ENSCLMT00005008174.1
      Conserved Domains (1) summary
      pfam10229
      Location:24 → 289
      MMADHC; Methylmalonic aciduria and homocystinuria type D protein

    4. XM_034562203.1 → XP_034418094.1  metabolism of cobalamin associated Db isoform X2

      Conserved Domains (1) summary
      pfam10229
      Location:2 → 239
      MMADHC; Methylmalonic aciduria and homocystinuria type D protein
    Nucleotide Protein
    Heading Accession and Version

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