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    LOC117621052 mitochondrial arginine transporter BAC2-like [ Prunus dulcis (almond) ]

    Gene ID: 117621052, updated on 6-Jun-2024

    Summary

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    Gene symbol
    LOC117621052
    Gene description
    mitochondrial arginine transporter BAC2-like
    Locus tag
    ALMOND_2B006319
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Prunus dulcis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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    Genomic context

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    See LOC117621052 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current ALMONDv2 (GCF_902201215.1) 3 NC_047652.1 (4911884..4913524, complement)

    Chromosome 3 - NC_047652.1Genomic Context describing neighboring genes Neighboring gene kinesin-like protein KIN-13B Neighboring gene pyridoxal 5'-phosphate synthase-like subunit PDX1.2 Neighboring gene mitochondrial arginine transporter BAC2-like Neighboring gene phosphatase and actin regulator 4B-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_047652.1 Chromosome 3 Reference ALMONDv2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mitochondrial arginine transporter BAC2-like
    Names
    PREDICTED: mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Prunus dulcis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ALMONDv2 Primary Assembly

    Genomic

    1. NC_047652.1 Reference ALMONDv2 Primary Assembly

      Range
      4911884..4913524 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034351312.1 → XP_034207203.1  mitochondrial arginine transporter BAC2-like

      UniProtKB/TrEMBL
      A0A5E4FZ17, A0AAD4W7Q0
      Conserved Domains (1) summary
      pfam00153
      Location:226 → 310
      Mito_carr; Mitochondrial carrier protein
    Nucleotide Protein
    Heading Accession and Version

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