U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    PLEKHA7 pleckstrin homology domain containing A7 [ Parus major (Great Tit) ]

    Gene ID: 107205738, updated on 3-Aug-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    PLEKHA7
    Gene description
    pleckstrin homology domain containing A7
    See related
    Ensembl:ENSPMJG00000008582
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Parus major
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PLEKHA7 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    30
    Annotation release Status Assembly Chr Location
    102 current Parus_major1.1 (GCF_001522545.3) 5 NC_031774.1 (12778610..12924213, complement)
    100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 5 NC_029274.1 (12778610..12924205, complement)

    Chromosome 5 - NC_031774.1Genomic Context describing neighboring genes Neighboring gene SRY-box transcription factor 6 Neighboring gene uncharacterized LOC107205477 Neighboring gene chromosome 5 C11orf58 homolog Neighboring gene uncharacterized LOC107205740 Neighboring gene phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha Neighboring gene ribosomal protein S13

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell-cell adhesion mediated by cadherin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in epithelial cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in pore complex assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in zonula adherens maintenance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of pore complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in zonula adherens IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    pleckstrin homology domain-containing family A member 7

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Parus_major1.1 Primary Assembly

    Genomic

    1. NC_031774.1 Reference Parus_major1.1 Primary Assembly

      Range
      12778610..12924213 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_033515371.1 → XP_033371262.1  pleckstrin homology domain-containing family A member 7 isoform X3

      Conserved Domains (4) summary
      PRK04778
      Location:635 → 868
      PRK04778; septation ring formation regulator EzrA; Provisional
      COG1196
      Location:712 → 804
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd13248
      Location:158 → 261
      PH_PEPP1_2_3; Phosphoinositol 3-phosphate binding proteins 1, 2, and 3 pleckstrin homology (PH) domain
      pfam00397
      Location:55 → 84
      WW; WW domain

    2. XM_019006967.2 → XP_018862512.1  pleckstrin homology domain-containing family A member 7 isoform X5

      Related
      ENSPMJP00000011004.1, ENSPMJT00000014546.1

    3. XM_033515370.1 → XP_033371261.1  pleckstrin homology domain-containing family A member 7 isoform X2

      Conserved Domains (6) summary
      smart00818
      Location:865 → 978
      Amelogenin; Amelogenins, cell adhesion proteins, play a role in the biomineralisation of teeth
      PHA03247
      Location:899 → 1091
      PHA03247; large tegument protein UL36; Provisional
      COG1196
      Location:732 → 824
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      PRK03918
      Location:653 → 871
      PRK03918; DNA double-strand break repair ATPase Rad50
      cd13248
      Location:158 → 281
      PH_PEPP1_2_3; Phosphoinositol 3-phosphate binding proteins 1, 2, and 3 pleckstrin homology (PH) domain
      pfam00397
      Location:55 → 84
      WW; WW domain

    4. XM_033515373.1 → XP_033371264.1  pleckstrin homology domain-containing family A member 7 isoform X4

      Conserved Domains (4) summary
      PRK04778
      Location:655 → 888
      PRK04778; septation ring formation regulator EzrA; Provisional
      COG1196
      Location:732 → 824
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd13248
      Location:158 → 281
      PH_PEPP1_2_3; Phosphoinositol 3-phosphate binding proteins 1, 2, and 3 pleckstrin homology (PH) domain
      pfam00397
      Location:55 → 84
      WW; WW domain

    5. XM_033515369.1 → XP_033371260.1  pleckstrin homology domain-containing family A member 7 isoform X1

      Conserved Domains (4) summary
      COG1196
      Location:732 → 824
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      PRK03918
      Location:653 → 871
      PRK03918; DNA double-strand break repair ATPase Rad50
      cd13248
      Location:158 → 281
      PH_PEPP1_2_3; Phosphoinositol 3-phosphate binding proteins 1, 2, and 3 pleckstrin homology (PH) domain
      pfam00397
      Location:55 → 84
      WW; WW domain

    6. XM_033515374.1 → XP_033371265.1  pleckstrin homology domain-containing family A member 7 isoform X6

      Related
      ENSPMJP00000011001.1, ENSPMJT00000014542.1
      Conserved Domains (3) summary
      COG1196
      Location:683 → 775
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      PRK03918
      Location:604 → 822
      PRK03918; DNA double-strand break repair ATPase Rad50
      cd13248
      Location:109 → 232
      PH_PEPP1_2_3; Phosphoinositol 3-phosphate binding proteins 1, 2, and 3 pleckstrin homology (PH) domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.