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    LOC116747674 ferritin light chain-like [ Phocoena sinus (vaquita) ]

    Gene ID: 116747674, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC116747674
    Gene description
    ferritin light chain-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Phocoena sinus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Phocoena
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    Genomic context

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    See LOC116747674 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current mPhoSin1.pri (GCF_008692025.1) X NC_045784.1 (13499174..13500432)

    Chromosome X - NC_045784.1Genomic Context describing neighboring genes Neighboring gene cyclin-dependent kinase 2-associated protein 1-like Neighboring gene gastrin releasing peptide receptor Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene cell division control protein 42 homolog

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045784.1 Chromosome X Reference mPhoSin1.pri

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ferric iron binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ferrous iron binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular iron ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular sequestering of iron ion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in iron ion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ferritin light chain-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Phocoena sinus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mPhoSin1.pri

    Genomic

    1. NC_045784.1 Reference mPhoSin1.pri

      Range
      13499174..13500432
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032620150.1 → XP_032476041.1  ferritin light chain-like

      Conserved Domains (1) summary
      cl00264
      Location:25 → 137
      Ferritin_like; Ferritin-like superfamily of diiron-containing four-helix-bundle proteins
    Nucleotide Protein
    Heading Accession and Version

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