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    hmox2b heme oxygenase 2b [ Etheostoma spectabile (orangethroat darter) ]

    Gene ID: 116702858, updated on 18-Mar-2024

    Summary

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    Gene symbol
    hmox2b
    Gene description
    heme oxygenase 2b
    Locus tag
    FQN60_003804
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Etheostoma spectabile
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Etheostomatinae; Etheostoma
    Also known as
    hmox2
    Orthologs
    human zebrafish all
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    Genomic context

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    See hmox2b in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current UIUC_Espe_1.0 (GCF_008692095.1) 15 NC_045747.1 (9054276..9060434, complement)

    Chromosome 15 - NC_045747.1Genomic Context describing neighboring genes Neighboring gene mitochondrial import inner membrane translocase subunit tim16-like Neighboring gene vasorin b Neighboring gene DnaJ heat shock protein family (Hsp40) member A3a Neighboring gene uncharacterized LOC116702854 Neighboring gene transfer RNA threonine (anticodon AGU) Neighboring gene transmembrane protein 100-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045747.1 Chromosome 15 Reference UIUC_Espe_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables heme oxygenase (decyclizing) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in heme catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in heme oxidation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to oxidative stress IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    heme oxygenase 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Etheostoma spectabile Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UIUC_Espe_1.0 Primary Assembly

    Genomic

    1. NC_045747.1 Reference UIUC_Espe_1.0 Primary Assembly

      Range
      9054276..9060434 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032537353.1 → XP_032393244.1  heme oxygenase 2

      UniProtKB/TrEMBL
      A0A5J5CX08
      Conserved Domains (1) summary
      pfam01126
      Location:26 → 230
      Heme_oxygenase; Heme oxygenase

    2. XM_032537351.1 → XP_032393242.1  heme oxygenase 2

      UniProtKB/TrEMBL
      A0A5J5CX08
      Conserved Domains (1) summary
      pfam01126
      Location:26 → 230
      Heme_oxygenase; Heme oxygenase

    3. XM_032537352.1 → XP_032393243.1  heme oxygenase 2

      UniProtKB/TrEMBL
      A0A5J5CX08
      Conserved Domains (1) summary
      pfam01126
      Location:26 → 230
      Heme_oxygenase; Heme oxygenase
    Nucleotide Protein
    Heading Accession and Version

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