U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC116548274 disintegrin and metalloproteinase domain-containing protein 1a-like [ Sapajus apella (tufted capuchin) ]

    Gene ID: 116548274, updated on 9-Nov-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC116548274
    Gene description
    disintegrin and metalloproteinase domain-containing protein 1a-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sapajus apella
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Sapajus
    Annotation information
    Annotation category: partial on reference assembly
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC116548274 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    100 current GSC_monkey_1.0 (GCF_009761245.1) Unplaced Scaffold NW_022445959.1 (555..2597)

    NW_022445959.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_022445959 Unplaced Scaffold Reference GSC_monkey_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metalloendopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in binding of sperm to zona pellucida IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in male gonad development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in external side of plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in sperm head plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    disintegrin and metalloproteinase domain-containing protein 1a-like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Sapajus apella Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GSC_monkey_1.0

    Genomic

    1. NW_022445959.1 Reference GSC_monkey_1.0

      Range
      555..2597
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032273818.1 → XP_032129709.1  disintegrin and metalloproteinase domain-containing protein 1a-like

      UniProtKB/TrEMBL
      A0A6J3HJ43
      Conserved Domains (4) summary
      smart00050
      Location:453 → 525
      DISIN; Homologues of snake disintegrins
      smart00608
      Location:527 → 666
      ACR; ADAM Cysteine-Rich Domain
      pfam01421
      Location:241 → 433
      Reprolysin; Reprolysin (M12B) family zinc metalloprotease
      pfam01562
      Location:81 → 196
      Pep_M12B_propep; Reprolysin family propeptide
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases