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    LOC116118614 caffeoylshikimate esterase-like [ Pistacia vera ]

    Gene ID: 116118614, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC116118614
    Gene description
    caffeoylshikimate esterase-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pistacia vera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Anacardiaceae; Pistacia
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    Genomic context

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    See LOC116118614 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    100 current PisVer_v2 (GCF_008641045.1) Unplaced Scaffold NW_022196722.1 (1260551..1261715)

    NW_022196722.1Genomic Context describing neighboring genes Neighboring gene probable carboxylesterase 18 Neighboring gene caffeoylshikimate esterase-like Neighboring gene caffeoylshikimate esterase-like Neighboring gene 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_022196722 Unplaced Scaffold Reference PisVer_v2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables lipase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    caffeoylshikimate esterase-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pistacia vera Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference PisVer_v2 Primary Assembly

    Genomic

    1. NW_022196722.1 Reference PisVer_v2 Primary Assembly

      Range
      1260551..1261715
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031404606.1 → XP_031260466.1  caffeoylshikimate esterase-like

      Conserved Domains (1) summary
      cl21494
      Location:9 → 322
      Abhydrolase; alpha/beta hydrolases
    Nucleotide Protein
    Heading Accession and Version

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