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    LOC116118823 N-terminal acetyltransferase A complex auxiliary subunit NAA15 [ Pistacia vera ]

    Gene ID: 116118823, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC116118823
    Gene description
    N-terminal acetyltransferase A complex auxiliary subunit NAA15
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pistacia vera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Anacardiaceae; Pistacia
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    Genomic context

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    See LOC116118823 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    100 current PisVer_v2 (GCF_008641045.1) Unplaced Scaffold NW_022195050.1 (937445..948346, complement)

    NW_022195050.1Genomic Context describing neighboring genes Neighboring gene palmitoyl-acyl carrier protein thioesterase, chloroplastic-like Neighboring gene E3 ubiquitin-protein ligase At1g63170 Neighboring gene DNA-repair protein XRCC1 Neighboring gene transfer RNA serine (anticodon AGA)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_022195050 Unplaced Scaffold Reference PisVer_v2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables peptide alpha-N-acetyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in N-terminal peptidyl-methionine acetylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    N-terminal acetyltransferase A complex auxiliary subunit NAA15

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pistacia vera Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference PisVer_v2 Primary Assembly

    Genomic

    1. NW_022195050.1 Reference PisVer_v2 Primary Assembly

      Range
      937445..948346 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031404815.1 → XP_031260675.1  N-terminal acetyltransferase A complex auxiliary subunit NAA15

      Conserved Domains (4) summary
      TIGR02917
      Location:3 → 256
      PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
      sd00006
      Location:79 → 105
      TPR; TPR repeat [structural motif]
      pfam13414
      Location:84 → 124
      TPR_11; TPR repeat
      pfam12569
      Location:187 → 696
      NARP1; NMDA receptor-regulated protein 1
    Nucleotide Protein
    Heading Accession and Version

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