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    si:dkey-150i13.2 mitochondrial carnitine/acylcarnitine carrier protein [ Sander lucioperca (pikeperch) ]

    Gene ID: 116060430, updated on 21-Aug-2024

    Summary

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    Gene symbol
    si:dkey-150i13.2
    Gene description
    mitochondrial carnitine/acylcarnitine carrier protein
    See related
    EnsemblRapid:ENSSLUG00000023011
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sander lucioperca
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Luciopercinae; Sander
    Orthologs
    zebrafish all
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    Genomic context

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    See si:dkey-150i13.2 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    101 current SLUC_FBN_1.2 (GCF_008315115.2) 12 NC_050184.1 (22821654..22831974)
    100 previous assembly SLUC_FBN_1 (GCF_008315115.1) Unplaced Scaffold NW_022172933.1 (95610..105921, complement)

    Chromosome 12 - NC_050184.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116060432 Neighboring gene small nucleolar RNA SNORA11 Neighboring gene necdin-like 2 Neighboring gene uncharacterized LOC116060437 Neighboring gene tafazzin, phospholipid-lysophospholipid transacylase Neighboring gene ATPase H+ transporting accessory protein 1a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables acyl carnitine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carnitine transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitochondrial transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial envelope IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mitochondrial carnitine/acylcarnitine carrier protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sander lucioperca Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SLUC_FBN_1.2 Primary Assembly

    Genomic

    1. NC_050184.1 Reference SLUC_FBN_1.2 Primary Assembly

      Range
      22821654..22831974
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031313987.2 → XP_031169847.1  mitochondrial carnitine/acylcarnitine carrier protein

      UniProtKB/TrEMBL
      A0A8D0AJA2, A0A8D0DBJ9
      Related
      ENSSLUP00000053040.2, ENSSLUT00000054598.2
      Conserved Domains (1) summary
      pfam00153
      Location:106 → 196
      Mito_carr; Mitochondrial carrier protein
    Nucleotide Protein
    Heading Accession and Version

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