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    TPM4 tropomyosin 4 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

    Gene ID: 100595904, updated on 8-Mar-2024

    Summary

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    Gene symbol
    TPM4
    Gene description
    tropomyosin 4
    See related
    EnsemblRapid:ENSNLEG00000005413
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nomascus leucogenys
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
    Orthologs
    human mouse all
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    Genomic context

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    See TPM4 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Asia_NLE_v1 (GCF_006542625.1) 10 NC_044390.1 (55081135..55116913, complement)
    102 previous assembly Nleu_3.0 (GCF_000146795.2) 10 NC_019825.1 (58517747..58552054, complement)

    Chromosome 10 - NC_044390.1Genomic Context describing neighboring genes Neighboring gene hematopoietic SH2 domain containing Neighboring gene RAB8A, member RAS oncogene family Neighboring gene uncharacterized LOC115836899 Neighboring gene uncharacterized LOC101176588

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin filament organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in muscle contraction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tropomyosin alpha-4 chain

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Asia_NLE_v1 Primary Assembly

    Genomic

    1. NC_044390.1 Reference Asia_NLE_v1 Primary Assembly

      Range
      55081135..55116913 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030820546.1 → XP_030676406.1  tropomyosin alpha-4 chain isoform X1

      Related
      ENSNLEP00000032623.2, ENSNLET00000047243.2
      Conserved Domains (1) summary
      pfam00261
      Location:48 → 282
      Tropomyosin

    2. XM_030820547.1 → XP_030676407.1  tropomyosin alpha-4 chain isoform X2

      Conserved Domains (1) summary
      pfam00261
      Location:32 → 266
      Tropomyosin

    3. XM_030820552.1 → XP_030676412.1  tropomyosin alpha-4 chain isoform X5

      Related
      ENSNLEP00000054771.1, ENSNLET00000075660.1
      Conserved Domains (1) summary
      pfam00261
      Location:1 → 156
      Tropomyosin

    4. XM_030820550.1 → XP_030676410.1  tropomyosin alpha-4 chain isoform X5

      Conserved Domains (1) summary
      pfam00261
      Location:1 → 156
      Tropomyosin

    5. XM_030820549.1 → XP_030676409.1  tropomyosin alpha-4 chain isoform X4

      Related
      ENSNLEP00000006560.3, ENSNLET00000006892.3
      Conserved Domains (1) summary
      pfam00261
      Location:2 → 203
      Tropomyosin

    6. XM_030820548.1 → XP_030676408.1  tropomyosin alpha-4 chain isoform X3

      UniProtKB/TrEMBL
      G1R039
      Related
      ENSNLEP00000054535.1, ENSNLET00000063076.1
      Conserved Domains (1) summary
      pfam00261
      Location:12 → 246
      Tropomyosin

    7. XM_030820553.1 → XP_030676413.1  tropomyosin alpha-4 chain isoform X6

      Conserved Domains (1) summary
      pfam00261
      Location:48 → 282
      Tropomyosin

    8. XM_030820554.1 → XP_030676414.1  tropomyosin alpha-4 chain isoform X7

      Conserved Domains (1) summary
      pfam00261
      Location:12 → 246
      Tropomyosin
    Nucleotide Protein
    Heading Accession and Version

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