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    bcd bicoid [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40830, updated on 2-Nov-2024

    Summary

    Official Symbol
    bcdprovided by FlyBase
    Official Full Name
    bicoidprovided by FlyBase
    Primary source
    FLYBASE:FBgn0000166
    Locus tag
    Dmel_CG1034
    See related
    AllianceGenome:FB:FBgn0000166
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Bcd; BCD; BG:DS00276.7; bic; Bicoid; CG1034; Dm-Bcd; Dmel\CG1034; mum; prd4
    Summary
    Enables DNA-binding transcription factor activity, RNA polymerase II-specific; nucleic acid binding activity; and translation repressor activity. Involved in several processes, including blastoderm segmentation; regulation of gene expression; and torso signaling pathway. Located in nucleus. Is expressed in several structures, including anterior endoderm anlage; egg chamber; foregut anlage in statu nascendi; germline cell; and ovary. [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
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    Genomic context

    See bcd in Genome Data Viewer
    Location:
    84A5-84A5; 3-48 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (6755842..6759466, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (2581564..2585188, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene zerknullt Neighboring gene long non-coding RNA:CR45593 Neighboring gene long non-coding RNA:CR44930 Neighboring gene Amalgam

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IC
    Inferred by Curator
    more info
    PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    bicoid
    Names
    CG1034-PA
    CG1034-PD
    CG1034-PE
    CG1034-PF
    CG1034-PG
    PRD gene 4
    bcd-PA
    bcd-PD
    bcd-PE
    bcd-PF
    bcd-PG
    multimorph

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      6755842..6759466 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_057477.5NP_476825.1  bicoid, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_476825.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P09081
      Related
      FBpp0081164
    2. NM_169157.3NP_731111.1  bicoid, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_731111.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P09081
      Related
      FBpp0081165
      Conserved Domains (1) summary
      pfam00046
      Location:101148
      Homeobox; Homeobox domain
    3. NM_176410.3NP_788587.1  bicoid, isoform G [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_788587.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P09081, Q5BI92, Q86BA9, Q86BP2, Q8INR7, Q8ST46, Q8STB1, Q8T9S9, Q8T9T0, Q8T9T1, Q95TN3, Q9UAM0, Q9VI47
      Related
      FBpp0081168
      Conserved Domains (1) summary
      pfam00046
      Location:106153
      Homeobox; Homeobox domain
    4. NM_176411.3NP_788588.1  bicoid, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_788588.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P09081
      Related
      FBpp0081167
      Conserved Domains (1) summary
      pfam00046
      Location:2572
      Homeobox; Homeobox domain
    5. NM_169159.4NP_731113.2  bicoid, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_731113.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P09081
      Related
      FBpp0081166
      Conserved Domains (1) summary
      pfam00046
      Location:3077
      Homeobox; Homeobox domain