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    gprc6a G protein-coupled receptor, class C, group 6, member A [ Gadus morhua (Atlantic cod) ]

    Gene ID: 115553853, updated on 17-Mar-2024

    Summary

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    Gene symbol
    gprc6a
    Gene description
    G protein-coupled receptor, class C, group 6, member A
    See related
    Ensembl:ENSGMOG00000007217
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gadus morhua
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Gadus
    Orthologs
    human zebrafish all
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    Genomic context

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    See gprc6a in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current gadMor3.0 (GCF_902167405.1) 11 NC_044058.1 (17094422..17098524, complement)

    Chromosome 11 - NC_044058.1Genomic Context describing neighboring genes Neighboring gene zinc finger containing ubiquitin peptidase 1 Neighboring gene karyopherin alpha 5 (importin alpha 6) Neighboring gene vascular endothelial growth factor Aa Neighboring gene uncharacterized LOC115554694

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_044058.1 Chromosome 11 Reference gadMor3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    G-protein coupled receptor family C group 6 member A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gadus morhua Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference gadMor3.0 Primary Assembly

    Genomic

    1. NC_044058.1 Reference gadMor3.0 Primary Assembly

      Range
      17094422..17098524 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030370377.1 → XP_030226237.1  G-protein coupled receptor family C group 6 member A

      UniProtKB/TrEMBL
      A0A8C5F5U9
      Related
      ENSGMOP00000007790.2, ENSGMOT00000008012.2
      Conserved Domains (4) summary
      cd14964
      Location:586 → 611
      7tm_GPCRs; TM helix 1 [structural motif]
      pfam07562
      Location:513 → 566
      NCD3G; Nine Cysteines Domain of family 3 GPCR
      cl10011
      Location:40 → 497
      Periplasmic_Binding_Protein_type1; Type 1 periplasmic binding fold superfamily
      cl28897
      Location:586 → 833
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    Nucleotide Protein
    Heading Accession and Version

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