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    LOC115561682 trace amine-associated receptor 1-like [ Gadus morhua (Atlantic cod) ]

    Gene ID: 115561682, updated on 23-Oct-2023

    Summary

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    Gene symbol
    LOC115561682
    Gene description
    trace amine-associated receptor 1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gadus morhua
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Gadus
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    Genomic context

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    See LOC115561682 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current gadMor3.0 (GCF_902167405.1) 16 NC_044063.1 (23954251..23955922, complement)

    Chromosome 16 - NC_044063.1Genomic Context describing neighboring genes Neighboring gene trace amine-associated receptor 13c-like Neighboring gene trace amine-associated receptor 13c-like Neighboring gene trace amine-associated receptor 1-like Neighboring gene trace amine-associated receptor 1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_044063.1 Chromosome 16 Reference gadMor3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables trace-amine receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in adenylate cyclase-activating adrenergic receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    trace amine-associated receptor 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gadus morhua Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference gadMor3.0 Primary Assembly

    Genomic

    1. NC_044063.1 Reference gadMor3.0 Primary Assembly

      Range
      23954251..23955922 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030381865.1 → XP_030237725.1  trace amine-associated receptor 1-like

      Conserved Domains (1) summary
      cd15314
      Location:4 → 287
      7tmA_TAAR1; trace amine-associated receptor 1 and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors
    Nucleotide Protein
    Heading Accession and Version

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