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    LOC115542778 scavenger receptor class F member 2-like [ Gadus morhua (Atlantic cod) ]

    Gene ID: 115542778, updated on 23-Oct-2023

    Summary

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    Gene symbol
    LOC115542778
    Gene description
    scavenger receptor class F member 2-like
    See related
    Ensembl:ENSGMOG00000035121
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gadus morhua
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Gadus
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    Genomic context

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    See LOC115542778 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    100 current gadMor3.0 (GCF_902167405.1) 4 NC_044051.1 (14195132..14202592)

    Chromosome 4 - NC_044051.1Genomic Context describing neighboring genes Neighboring gene atrial natriuretic peptide receptor 2-like Neighboring gene aminolevulinate dehydratase Neighboring gene transmembrane protein 203 Neighboring gene ubiquinol-cytochrome c reductase, complex III subunit X Neighboring gene zinc finger, matrin-type 5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_044051.1 Chromosome 4 Reference gadMor3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables scavenger receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    scavenger receptor class F member 2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gadus morhua Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference gadMor3.0 Primary Assembly

    Genomic

    1. NC_044051.1 Reference gadMor3.0 Primary Assembly

      Range
      14195132..14202592
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030355196.1 → XP_030211056.1  scavenger receptor class F member 2-like isoform X1

      Conserved Domains (1) summary
      pfam17061
      Location:603 → 766
      PARM

    2. XM_030355197.1 → XP_030211057.1  scavenger receptor class F member 2-like isoform X2

      UniProtKB/TrEMBL
      A0A8C5C4D9
      Related
      ENSGMOP00000054822.1, ENSGMOT00000061976.1
      Conserved Domains (1) summary
      pfam17061
      Location:602 → 765
      PARM
    Nucleotide Protein
    Heading Accession and Version

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