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    btbd17b BTB (POZ) domain containing 17b [ Gadus morhua (Atlantic cod) ]

    Gene ID: 115556610, updated on 17-Mar-2024

    Summary

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    Gene symbol
    btbd17b
    Gene description
    BTB (POZ) domain containing 17b
    See related
    Ensembl:ENSGMOG00000033172
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gadus morhua
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Gadus
    Orthologs
    zebrafish all
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    Genomic context

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    See btbd17b in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current gadMor3.0 (GCF_902167405.1) 2 NC_044049.1 (1337786..1342025, complement)

    Chromosome 2 - NC_044049.1Genomic Context describing neighboring genes Neighboring gene inward rectifier potassium channel 2-like Neighboring gene dual specificity mitogen-activated protein kinase kinase 6-like Neighboring gene G-protein coupled receptor family C group 5 member C-like Neighboring gene coiled-coil domain containing 137

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_044049.1 Chromosome 2 Reference gadMor3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    BTB/POZ domain-containing protein 17-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gadus morhua Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference gadMor3.0 Primary Assembly

    Genomic

    1. NC_044049.1 Reference gadMor3.0 Primary Assembly

      Range
      1337786..1342025 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030373746.1 → XP_030229606.1  BTB/POZ domain-containing protein 17-like

      UniProtKB/TrEMBL
      A0A8C5CFA4
      Related
      ENSGMOP00000061189.1, ENSGMOT00000036139.1
      Conserved Domains (2) summary
      cd18493
      Location:176 → 246
      BACK_BTBD17; BACK (BTB and C-terminal Kelch) domain found in BTB/POZ domain-containing protein 17 (BTBD17)
      cl38908
      Location:51 → 165
      BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
    Nucleotide Protein
    Heading Accession and Version

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