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    ST6GALNAC5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 [ Taeniopygia guttata (zebra finch) ]

    Gene ID: 100224116, updated on 13-Aug-2024

    Summary

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    Gene symbol
    ST6GALNAC5
    Gene description
    ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
    See related
    Ensembl:ENSTGUG00000007050
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Taeniopygia guttata
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
    Orthologs
    human mouse all
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    Genomic context

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    See ST6GALNAC5 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current bTaeGut1.4.pri (GCF_003957565.2) 8 NC_044220.2 (11377939..11445479)
    105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 8 NC_045007.1 (11426968..11494547)

    Chromosome 8 - NC_044220.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115496172 Neighboring gene ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 Neighboring gene PIF1 5'-to-3' DNA helicase Neighboring gene phosphatidylinositol glycan anchor biosynthesis class K Neighboring gene adenylate kinase 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ganglioside biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in oligosaccharide metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bTaeGut1.4.pri Primary Assembly

    Genomic

    1. NC_044220.2 Reference bTaeGut1.4.pri Primary Assembly

      Range
      11377939..11445479
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030278970.3 → XP_030134830.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5

      UniProtKB/TrEMBL
      H0Z9K5
      Related
      ENSTGUP00000007258.2
      Conserved Domains (1) summary
      pfam00777
      Location:85 → 313
      Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
    Nucleotide Protein
    Heading Accession and Version

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