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    LACBIDRAFT_300658 uncharacterized protein [ Laccaria bicolor S238N-H82 ]

    Gene ID: 6069777, updated on 28-Dec-2023

    Summary

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    Gene symbol
    LACBIDRAFT_300658
    Gene description
    uncharacterized protein
    Locus tag
    LACBIDRAFT_300658
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Laccaria bicolor S238N-H82 (strain: S238N-H82)
    Lineage
    Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Agaricineae; Hydnangiaceae; Laccaria
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    Genomic context

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    See LACBIDRAFT_300658 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_001889872.1Genomic Context describing neighboring genes Neighboring gene elongase of fatty acids, ELO Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_001889872.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis. Martin F, et al. Nature, 2008 Mar 6. PMID 18322534
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein-folding chaperone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in [2Fe-2S] cluster assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein complex oligomerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001889872.1 Reference assembly

      Range
      239560..240346 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001873766.1 → XP_001873801.1  uncharacterized protein LACBIDRAFT_300658 [Laccaria bicolor S238N-H82]

      See identical proteins and their annotated locations for XP_001873801.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B0CPT9
      Conserved Domains (3) summary
      cd06257
      Location:61 → 123
      DnaJ; DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, ...
      PRK05014
      Location:65 → 224
      hscB; co-chaperone HscB; Provisional
      pfam07743
      Location:149 → 220
      HSCB_C; HSCB C-terminal oligomerization domain
    Nucleotide Protein
    Heading Accession and Version

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