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    LOC101071215 polyadenylate-binding protein 1-like [ Takifugu rubripes (torafugu) ]

    Gene ID: 101071215, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC101071215
    Gene description
    polyadenylate-binding protein 1-like
    See related
    Ensembl:ENSTRUG00000003767
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Takifugu rubripes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
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    Genomic context

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    See LOC101071215 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current fTakRub1.2 (GCF_901000725.2) 12 NC_042296.1 (2527255..2533176)
    101 previous assembly FUGU5 (GCF_000180615.1) 12 NC_018901.1 (2763204..2769115, complement)

    Chromosome 12 - NC_042296.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 706-like Neighboring gene 14-3-3 protein beta/alpha-A-like Neighboring gene small nucleolar RNA SNORA5 Neighboring gene small nucleolar RNA SNORA5 Neighboring gene type-4 ice-structuring protein LS-12-like Neighboring gene limb and CNS expressed 1 like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    polyadenylate-binding protein 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fTakRub1.2 Primary Assembly

    Genomic

    1. NC_042296.1 Reference fTakRub1.2 Primary Assembly

      Range
      2527255..2533176
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003968912.3 → XP_003968961.2  polyadenylate-binding protein 1-like

      UniProtKB/TrEMBL
      A0A674N9S3
      Related
      ENSTRUP00000066877.1, ENSTRUT00000060929.1
      Conserved Domains (1) summary
      TIGR01628
      Location:11 → 614
      PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    Nucleotide Protein
    Heading Accession and Version

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