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    LOC101073380 ankyrin repeat and MYND domain-containing protein 2-like [ Takifugu rubripes (torafugu) ]

    Gene ID: 101073380, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC101073380
    Gene description
    ankyrin repeat and MYND domain-containing protein 2-like
    See related
    Ensembl:ENSTRUG00000013555
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Takifugu rubripes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
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    Genomic context

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    See LOC101073380 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current fTakRub1.2 (GCF_901000725.2) 12 NC_042296.1 (9434391..9443231)
    101 previous assembly FUGU5 (GCF_000180615.1) 12 NC_018901.1 (7369461..7376056)

    Chromosome 12 - NC_042296.1Genomic Context describing neighboring genes Neighboring gene Rho/Rac guanine nucleotide exchange factor 2 Neighboring gene tropomyosin3 Neighboring gene activating transcription factor 6 beta Neighboring gene VPS52 subunit of GARP complex Neighboring gene ribosomal protein S18

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of smoothened signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ankyrin repeat and MYND domain-containing protein 2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fTakRub1.2 Primary Assembly

    Genomic

    1. NC_042296.1 Reference fTakRub1.2 Primary Assembly

      Range
      9434391..9443231
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029845613.1 → XP_029701473.1  ankyrin repeat and MYND domain-containing protein 2-like isoform X1

      UniProtKB/TrEMBL
      H2UCC8
      Conserved Domains (4) summary
      sd00045
      Location:45 → 77
      ANK; ANK repeat [structural motif]
      pfam01753
      Location:320 → 357
      zf-MYND; MYND finger
      pfam12796
      Location:17 → 110
      Ank_2; Ankyrin repeats (3 copies)
      cl39094
      Location:84 → 145
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_029845615.1 → XP_029701475.1  ankyrin repeat and MYND domain-containing protein 2-like isoform X2

      UniProtKB/TrEMBL
      H2UCC8
      Conserved Domains (4) summary
      sd00045
      Location:45 → 77
      ANK; ANK repeat [structural motif]
      pfam01753
      Location:311 → 348
      zf-MYND; MYND finger
      pfam12796
      Location:17 → 110
      Ank_2; Ankyrin repeats (3 copies)
      cl39094
      Location:84 → 145
      Ank_2; Ankyrin repeats (3 copies)

    3. XM_029845614.1 → XP_029701474.1  ankyrin repeat and MYND domain-containing protein 2-like isoform X1

      UniProtKB/TrEMBL
      H2UCC8
      Related
      ENSTRUP00000034597.3, ENSTRUT00000034723.3

    4. XM_003969242.2 → XP_003969291.2  ankyrin repeat and MYND domain-containing protein 2-like isoform X3

      UniProtKB/TrEMBL
      A0A674N5H3, H2UCC8
      Related
      ENSTRUP00000068812.1, ENSTRUT00000073815.1
      Conserved Domains (4) summary
      sd00045
      Location:45 → 77
      ANK; ANK repeat [structural motif]
      pfam01753
      Location:320 → 357
      zf-MYND; MYND finger
      pfam12796
      Location:17 → 110
      Ank_2; Ankyrin repeats (3 copies)
      cl39094
      Location:84 → 145
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein
    Heading Accession and Version

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