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    Lcncavp2 allergen lipocalin Cav p 2.0101 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100534654, updated on 29-Feb-2024

    Summary

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    Gene symbol
    Lcncavp2
    Gene description
    allergen lipocalin Cav p 2.0101
    See related
    Ensembl:ENSCPOG00000037628
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
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    Genomic context

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    See Lcncavp2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947516.1 (2223711..2229184, complement)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176298.1 (473062..478535, complement)

    NW_026947516.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134474597 Neighboring gene U6 spliceosomal RNA Neighboring gene lipocalin Cav p 2.0101-like Neighboring gene lipocalin Cav p 2.0101-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evaluation of two new recombinant guinea-pig lipocalins, Cav p 2 and Cav p 3, in the diagnosis of guinea-pig allergy. Hilger C, et al. Clin Exp Allergy, 2011 Jun. PMID 21518038
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables odorant binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables small molecule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lipocalin Cav p 2.0101
    Names
    Lipocalin Cav p 2.0101
    Major allergen Cav p 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001205184.1 → NP_001192113.1  lipocalin Cav p 2.0101 precursor

      See identical proteins and their annotated locations for NP_001192113.1

      Status: PROVISIONAL

      Source sequence(s)
      FN256284
      UniProtKB/Swiss-Prot
      F0UZ11, P83508
      Related
      ENSCPOP00000025189.1, ENSCPOT00000035307.1
      Conserved Domains (1) summary
      cd19427
      Location:21 → 168
      lipocalin_OBP-like; Lipocalin odorant-binding protein and similar proteins

    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947516.1 Reference mCavPor4.1

      Range
      2223711..2229184 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P83508.2 GenPept UniProtKB/Swiss-Prot:P83508

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