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    LOC6032806 aspartyl/asparaginyl beta-hydroxylase [ Culex quinquefasciatus (southern house mosquito) ]

    Gene ID: 6032806, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC6032806
    Gene description
    aspartyl/asparaginyl beta-hydroxylase
    See related
    VectorBase:CQUJHB012466; EnsemblRapid:LOC6032806
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Culex quinquefasciatus
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Culicini; Culex; Culex
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC6032806 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    100 current VPISU_Cqui_1.0_pri_paternal (GCF_015732765.1) 3 NC_051863.1 (201187205..201199503)

    Chromosome 3 - NC_051863.1Genomic Context describing neighboring genes Neighboring gene perlucin-like protein Neighboring gene E3 ubiquitin-protein ligase Topors Neighboring gene venom carboxylesterase-6 Neighboring gene venom carboxylesterase-6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_051863.1 Chromosome 3 Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables peptidyl-aspartic acid 3-dioxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptidyl-aspartic acid hydroxylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    aspartyl/asparaginyl beta-hydroxylase; midasin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Culex quinquefasciatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

    Genomic

    1. NC_051863.1 Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

      Range
      201187205..201199503
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038260515.1 → XP_038116443.1  aspartyl/asparaginyl beta-hydroxylase isoform X1

      Related
      XP_038116443.1, XM_038260515.1
      Conserved Domains (3) summary
      COG0457
      Location:875 → 1142
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:975 → 1003
      TPR; TPR repeat [structural motif]
      pfam05118
      Location:1115 → 1266
      Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase

    2. XM_038260516.1 → XP_038116444.1  aspartyl/asparaginyl beta-hydroxylase isoform X2

      Related
      XP_038116444.1, XM_038260516.1
      Conserved Domains (3) summary
      COG0457
      Location:871 → 1138
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:971 → 999
      TPR; TPR repeat [structural motif]
      pfam05118
      Location:1111 → 1262
      Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase

    3. XM_038260519.1 → XP_038116447.1  aspartyl/asparaginyl beta-hydroxylase isoform X5

      Related
      XP_038116447.1, XM_038260519.1
      Conserved Domains (3) summary
      COG0457
      Location:749 → 1016
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:849 → 877
      TPR; TPR repeat [structural motif]
      pfam05118
      Location:989 → 1140
      Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase

    4. XM_038260518.1 → XP_038116446.1  aspartyl/asparaginyl beta-hydroxylase isoform X4

      Related
      XP_038116446.1, XM_038260518.1
      Conserved Domains (3) summary
      COG0457
      Location:785 → 1052
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:885 → 913
      TPR; TPR repeat [structural motif]
      pfam05118
      Location:1025 → 1176
      Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase

    5. XM_038260517.1 → XP_038116445.1  aspartyl/asparaginyl beta-hydroxylase isoform X3

      Related
      XP_038116445.1, XM_038260517.1
      Conserved Domains (3) summary
      COG0457
      Location:801 → 1068
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:901 → 929
      TPR; TPR repeat [structural motif]
      pfam05118
      Location:1041 → 1192
      Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase

    6. XM_038260521.1 → XP_038116449.1  midasin isoform X7

      Related
      XP_038116449.1, XM_038260521.1

    7. XM_038260522.1 → XP_038116450.1  midasin isoform X8

      Related
      XP_038116450.1, XM_038260522.1

    8. XM_038260520.1 → XP_038116448.1  aspartyl/asparaginyl beta-hydroxylase isoform X6

      Related
      XP_038116448.1, XM_038260520.1
      Conserved Domains (3) summary
      COG0457
      Location:650 → 917
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:750 → 778
      TPR; TPR repeat [structural motif]
      pfam05118
      Location:890 → 1041
      Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase
    Nucleotide Protein Strain
    Heading Accession and Version

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