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    ompX outer membrane protease, receptor for phage OX2 [ Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ]

    Gene ID: 1252352, updated on 6-Oct-2023

    Summary

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    Gene symbol
    ompX
    Gene description
    outer membrane protease, receptor for phage OX2
    Locus tag
    STM0833
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (strain: LT2, serovar: Typhimurium, sub-species: enterica, culture-collection: ATCC:700720, culture-collection: SGSC:1412, type-material: type strain of Salmonella enterica)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella
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    Genomic context

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    Sequence:
    NC_003197.2 (899528..900052)

    NC_003197.2Genomic Context describing neighboring genes Neighboring gene stress response DNA-binding protein; starvation induced resistance to H2O2 Neighboring gene putative permease Neighboring gene putative integral membrane protein Neighboring gene putative Mn-dependent transcriptional regulator Neighboring gene putative di- and tricarboxylate transporters

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003197.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic regulation of the ompX porin of Salmonella Typhimurium in response to hydrogen peroxide stress. Briones AC, et al. Biol Res, 2022 Feb 22. PMID 35193678, Free PMC Article
    2. Systematic deletion of Salmonella small RNA genes identifies CyaR, a conserved CRP-dependent riboregulator of OmpX synthesis. Papenfort K, et al. Mol Microbiol, 2008 May. PMID 18399940
    3. Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. McClelland M, et al. Nature, 2001 Oct 25. PMID 11677609

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Genetic regulation of the ompX porin of Salmonella Typhimurium in response to hydrogen peroxide stress.
      Title: Genetic regulation of the ompX porin of Salmonella Typhimurium in response to hydrogen peroxide stress.
    2. CyaR (formerly RyeE) sRNA as an ompX repressor was identified.(CyaR)
      Title: Systematic deletion of Salmonella small RNA genes identifies CyaR, a conserved CRP-dependent riboregulator of OmpX synthesis.
    Submit: New GeneRIF Correction

    General gene information

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    regulatory

    • Loc: 899528-899533 regulatory_class = ribosome_binding_site

    General protein information

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    Preferred Names
    outer membrane protease, receptor for phage OX2
    NP_459810.1
    • similar to E. coli outer membrane protein X (AAC73901.1); Blastp hit to AAC73901.1 (171 aa), 91% identity in aa 1 - 171

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003197.2 Reference assembly

      Range
      899528..900052
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_459810.1 outer membrane protease, receptor for phage OX2 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

      See identical proteins and their annotated locations for NP_459810.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5U0DHQ7, A0A5U7UZT4, A0A5V0B874, A0A605QQI7, A0A710KH40, A0A738AWM5, A0A738DWC8, A0A747NEL1, A0A749BQ53, A0A750HXJ5, A0A754E0P6
      Conserved Domains (1) summary
      PRK09408
      Location:1 → 171
      ompX; outer membrane protein OmpX
    Nucleotide Protein
    Heading Accession and Version

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