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    tab2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [ Scleropages formosus (Asian bonytongue) ]

    Gene ID: 108929403, updated on 14-Mar-2024

    Summary

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    Gene symbol
    tab2
    Gene description
    TGF-beta activated kinase 1 (MAP3K7) binding protein 2
    See related
    Ensembl:ENSSFOG00015020826
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Scleropages formosus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
    Orthologs
    human zebrafish all
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    Genomic context

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    See tab2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    101 current fSclFor1.1 (GCF_900964775.1) 1 NC_041806.1 (43450396..43477481)
    100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017371616.1 (266345..274615, complement)

    Chromosome 1 - NC_041806.1Genomic Context describing neighboring genes Neighboring gene adenosylmethionine decarboxylase 1 Neighboring gene cyclin-dependent kinase 19 Neighboring gene zinc finger CCCH-type containing 12D Neighboring gene peptidylprolyl isomerase (cyclophilin)-like 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables K63-linked polyubiquitin modification-dependent protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    TGF-beta-activated kinase 1 and MAP3K7-binding protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fSclFor1.1 Primary Assembly

    Genomic

    1. NC_041806.1 Reference fSclFor1.1 Primary Assembly

      Range
      43450396..43477481
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029253834.1 → XP_029109667.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C9SBR3
      Related
      ENSSFOP00015032588.1, ENSSFOT00015032951.2
      Conserved Domains (5) summary
      smart00547
      Location:736 → 759
      ZnF_RBZ; Zinc finger domain
      PHA03247
      Location:241 → 551
      PHA03247; large tegument protein UL36; Provisional
      cd14362
      Location:9 → 50
      CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
      sd00029
      Location:737 → 756
      zf-RanBP2; RanBP2-type Zn finger [structural motif]
      pfam09770
      Location:112 → 273
      PAT1; Topoisomerase II-associated protein PAT1

    2. XM_029253835.1 → XP_029109668.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A0P7ZFD6
      Related
      ENSSFOP00015032598.1, ENSSFOT00015032963.2
      Conserved Domains (5) summary
      smart00547
      Location:704 → 727
      ZnF_RBZ; Zinc finger domain
      PHA03247
      Location:241 → 551
      PHA03247; large tegument protein UL36; Provisional
      cd14362
      Location:9 → 50
      CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
      sd00029
      Location:705 → 724
      zf-RanBP2; RanBP2-type Zn finger [structural motif]
      pfam09770
      Location:112 → 273
      PAT1; Topoisomerase II-associated protein PAT1
    Nucleotide Protein
    Heading Accession and Version

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