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    LOC114421161 protein tesmin/TSO1-like CXC 5 [ Glycine soja ]

    Gene ID: 114421161, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC114421161
    Gene description
    protein tesmin/TSO1-like CXC 5
    Locus tag
    D0Y65_019530
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine soja
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC114421161 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current ASM419377v2 (GCF_004193775.1) 8 NC_041009.1 (2974453..2980584)

    Chromosome 8 - NC_041009.1Genomic Context describing neighboring genes Neighboring gene protein NRT1/ PTR FAMILY 1.2-like Neighboring gene cyclin-dependent kinase F-1-like Neighboring gene uncharacterized LOC114423013 Neighboring gene proteinaceous RNase P 1, chloroplastic/mitochondrial-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_041009.1 Chromosome 8 Reference ASM419377v2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein tesmin/TSO1-like CXC 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine soja Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM419377v2 Primary Assembly

    Genomic

    1. NC_041009.1 Reference ASM419377v2 Primary Assembly

      Range
      2974453..2980584
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028386979.1 → XP_028242780.1  protein tesmin/TSO1-like CXC 5

      UniProtKB/TrEMBL
      A0A445J9G0, A0A445KSG7
      Conserved Domains (1) summary
      pfam03638
      Location:179 → 214
      TCR; Tesmin/TSO1-like CXC domain, cysteine-rich domain
    Nucleotide Protein
    Heading Accession and Version

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