U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC114310536 ethylene-responsive transcription factor 1A-like [ Camellia sinensis ]

    Gene ID: 114310536, updated on 21-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC114310536
    Gene description
    ethylene-responsive transcription factor 1A-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Camellia sinensis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC114310536 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    100 current AHAU_CSS_1 (GCF_004153795.1) Unplaced Scaffold NW_021024895.1 (881057..882063, complement)

    NW_021024895.1Genomic Context describing neighboring genes Neighboring gene putative disease resistance protein At4g11170 Neighboring gene uncharacterized LOC114310566 Neighboring gene ethylene-responsive transcription factor 5-like Neighboring gene agamous-like MADS-box protein AGL65

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_021024895 Unplaced Scaffold Reference AHAU_CSS_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ethylene-activated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    ethylene-responsive transcription factor 1A-like
    Names
    ERF transcription factor

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Camellia sinensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference AHAU_CSS_1 Primary Assembly

    Genomic

    1. NW_021024895.1 Reference AHAU_CSS_1 Primary Assembly

      Range
      881057..882063 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028256580.1 → XP_028112381.1  ethylene-responsive transcription factor 1A-like

      UniProtKB/TrEMBL
      A0A4S4DG69, D3Y3E0
      Conserved Domains (1) summary
      smart00380
      Location:108 → 172
      AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases