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    LOC114079114 T-cell surface glycoprotein CD1a-like [ Marmota flaviventris (yellow-bellied marmot) ]

    Gene ID: 114079114, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC114079114
    Gene description
    T-cell surface glycoprotein CD1a-like
    See related
    EnsemblRapid:ENSMFVG00000017461
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Marmota flaviventris
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
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    Genomic context

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    See LOC114079114 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    101 current GSC_YBM_2.0 (GCF_003676075.2) Unplaced Scaffold NW_023144900.1 (413818..422201, complement)
    100 previous assembly ASM367607v1 (GCF_003676075.1) Unplaced Scaffold NW_020963619.1 (413814..422201, complement)

    NW_023144900.1Genomic Context describing neighboring genes Neighboring gene T-cell surface glycoprotein CD1a-like Neighboring gene T-cell surface glycoprotein CD1a-like Neighboring gene T-cell surface glycoprotein CD1a-like Neighboring gene T-cell surface glycoprotein CD1a-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables endogenous lipid antigen binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables exogenous lipid antigen binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables lipopeptide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in antigen processing and presentation, endogenous lipid antigen via MHC class Ib IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in antigen processing and presentation, exogenous lipid antigen via MHC class Ib IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of T cell mediated cytotoxicity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in external side of plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    T-cell surface glycoprotein CD1a-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Marmota flaviventris Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GSC_YBM_2.0 Primary Assembly

    Genomic

    1. NW_023144900.1 Reference GSC_YBM_2.0 Primary Assembly

      Range
      413818..422201 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027920239.2 → XP_027776040.1  T-cell surface glycoprotein CD1a-like isoform X3

    2. XM_027920238.1 → XP_027776039.1  T-cell surface glycoprotein CD1a-like isoform X2

    3. XM_027920237.1 → XP_027776038.1  T-cell surface glycoprotein CD1a-like isoform X1

      Related
      ENSMFVP00000027986.1, ENSMFVT00000030936.1
    Nucleotide Protein
    Heading Accession and Version

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