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    PVX_086270 hypothetical protein [ Plasmodium vivax (malaria parasite P. vivax) ]

    Gene ID: 5476225, updated on 16-Nov-2023

    Summary

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    Gene symbol
    PVX_086270
    Gene description
    hypothetical protein
    Locus tag
    PVX_086270
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium vivax (strain: Salvador I)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium)
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    Genomic context

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    See PVX_086270 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    2
    Sequence:
    Chromosome: 13; NC_009918.1 (1958926..1964805)

    Chromosome 13 - NC_009918.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein, conserved Neighboring gene hypothetical protein, conserved Neighboring gene hypothetical protein, conserved

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009918.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Carlton JM, et al. Nature, 2008 Oct 9. PMID 18843361, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell division IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hypothetical protein
    XP_001616917.1
    • encoded by transcript PVX_086270A

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009918.1 Reference assembly

      Range
      1958926..1964805
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001616867.1 → XP_001616917.1  hypothetical protein PVX_086270 [Plasmodium vivax]

      See identical proteins and their annotated locations for XP_001616917.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0J9SPR4, A0A0J9VTJ5, A5K1J3
      Conserved Domains (3) summary
      sd00006
      Location:920 → 946
      TPR; TPR repeat [structural motif]
      pfam12947
      Location:1584 → 1632
      EGF_3; EGF domain
      pfam13414
      Location:953 → 1013
      TPR_11; TPR repeat
    Nucleotide Protein
    Heading Accession and Version

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