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    CCT7 chaperonin containing TCP1 subunit 7 [ Pipra filicauda (Wire-tailed manakin) ]

    Gene ID: 113985044, updated on 3-Aug-2024

    Summary

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    Gene symbol
    CCT7
    Gene description
    chaperonin containing TCP1 subunit 7
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pipra filicauda
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Pipra
    Orthologs
    human mouse all
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    Genomic context

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    See CCT7 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    101 current ASM394559v2 (GCF_003945595.2) Unplaced Scaffold NW_024104721.1 (88940..103366, complement)
    100 previous assembly ASM394559v1 (GCF_003945595.1) Unplaced Scaffold NW_020897530.1 (190397..204765)

    NW_024104721.1Genomic Context describing neighboring genes Neighboring gene early growth response 4 Neighboring gene F-box protein 41 Neighboring gene protease associated domain containing 1 Neighboring gene SMYD family member 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP-dependent protein folding chaperone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables unfolded protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein folding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of chaperonin-containing T-complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    T-complex protein 1 subunit eta

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pipra filicauda Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM394559v2

    Genomic

    1. NW_024104721.1 Reference ASM394559v2

      Range
      88940..103366 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027715584.2 → XP_027571385.1  T-complex protein 1 subunit eta isoform X1

      UniProtKB/TrEMBL
      A0A6J2G7M0

    2. XM_027715585.2 → XP_027571386.1  T-complex protein 1 subunit eta isoform X2

      UniProtKB/TrEMBL
      A0A6J2G7T8
      Conserved Domains (1) summary
      cd03340
      Location:5 → 525
      TCP1_eta; TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), ...
    Nucleotide Protein
    Heading Accession and Version

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