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    LOC113846979 probable aldehyde dehydrogenase [ Abrus precatorius (Indian licorice) ]

    Gene ID: 113846979, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC113846979
    Gene description
    probable aldehyde dehydrogenase
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Abrus precatorius
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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    Genomic context

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    See LOC113846979 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    100 current Abrus_2018 (GCF_003935025.1) Unplaced Scaffold NW_020874428.1 (37071252..37078612)

    NW_020874428.1Genomic Context describing neighboring genes Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene probable WRKY transcription factor 61 Neighboring gene 50S ribosomal protein L12, chloroplastic-like Neighboring gene probable rRNA-processing protein EBP2 homolog

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020874428 Unplaced Scaffold Reference Abrus_2018

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 1-pyrroline-5-carboxylate dehydrogenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables aldehyde dehydrogenase (NAD+) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proline catabolic process to glutamate IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable aldehyde dehydrogenase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Abrus precatorius Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Abrus_2018

    Genomic

    1. NW_020874428.1 Reference Abrus_2018

      Range
      37071252..37078612
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027475782.1 → XP_027331583.1  probable aldehyde dehydrogenase isoform X2

      UniProtKB/TrEMBL
      A0A8B8JLM6

    2. XM_027475781.1 → XP_027331582.1  probable aldehyde dehydrogenase isoform X1

      UniProtKB/TrEMBL
      A0A8B8JJJ0
    Nucleotide Protein
    Heading Accession and Version

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