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    Gbgt1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) [ Cricetulus griseus (Chinese hamster) ]

    Gene ID: 100771256, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Gbgt1
    Gene description
    globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group)
    Locus tag
    I79_023704
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cricetulus griseus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    human mouse all
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    Genomic context

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    See Gbgt1 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003616640.1 (102459..106246, complement)
    104 current CriGri-PICRH-1.0 (GCF_003668045.3) 6 NC_048599.1 (140180249..140189729)

    NW_003616640.1Genomic Context describing neighboring genes Neighboring gene carboxyl ester lipase Neighboring gene ral guanine nucleotide dissociation stimulator

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables globoside alpha-N-acetylgalactosaminyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in lipid glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    globoside alpha-1,3-N-acetylgalactosaminyltransferase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CriGri_1.0 Primary Assembly

    Genomic

    1. NW_003616640.1 Reference CriGri_1.0 Primary Assembly

      Range
      102459..106246 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003514478.5 → XP_003514526.2  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C2N2Z7, G3IIN1
      Conserved Domains (1) summary
      pfam03414
      Location:59 → 346
      Glyco_transf_6; Glycosyltransferase family 6

    Alternate CriGri-PICRH-1.0

    Genomic

    1. NC_048599.1 Alternate CriGri-PICRH-1.0

      Range
      140180249..140189729
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027423052.2 → XP_027278853.1  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X2

      UniProtKB/TrEMBL
      A0A9J7GBR2, G3IIN1

    2. XM_027423053.2 → XP_027278854.1  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X2

      UniProtKB/TrEMBL
      A0A9J7GBR2, G3IIN1

    3. XM_027423054.2 → XP_027278855.1  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X3

      UniProtKB/TrEMBL
      A0A9J7JW92, G3IIN1
    Nucleotide Protein Strain
    Heading Accession and Version

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