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Links from Protein

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    ACT9 actin 9 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818809, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ACT9
    Official Full Name
    actin 9
    Primary source
    TAIR:AT2G42090
    Locus tag
    AT2G42090
    See related
    Araport:AT2G42090
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    actin 9; T6D20.2; T6D20_2
    Summary
    actin related gene or pseudogene, based on sequence divergence and lack of expression
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    Genomic context

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    See ACT9 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (17556744..17558369)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene DnaJ domain protein Neighboring gene Chaperone DnaJ-domain superfamily protein Neighboring gene ncRNA Neighboring gene Actin-like ATPase superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    actin 9
    NP_181739.1
    • actin 9 (ACT9); FUNCTIONS IN: structural constituent of cytoskeleton, ATP binding; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin-11 (TAIR:AT3G12110.1); Has 13583 Blast hits to 13117 proteins in 2659 species: Archae - 4; Bacteria - 4; Metazoa - 5780; Fungi - 3581; Plants - 1612; Viruses - 2; Other Eukaryotes - 2600 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      17556744..17558369
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129772.1 → NP_181739.1  actin 9 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181739.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P93738
      UniProtKB/TrEMBL
      A0A5S9X6A1, A0A654F2H2
      Conserved Domains (2) summary
      smart00268
      Location:2 → 365
      ACTIN; Actin
      cl17037
      Location:1 → 365
      NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P93738.1

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