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    RRAGC Ras related GTP binding C [ Athene cunicularia (burrowing owl) ]

    Gene ID: 113488240, updated on 3-Aug-2024

    Summary

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    Gene symbol
    RRAGC
    Gene description
    Ras related GTP binding C
    See related
    Ensembl:ENSACUG00000009192
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Athene cunicularia
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Strigidae; Athene
    Orthologs
    human mouse all
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    Genomic context

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    See RRAGC in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current athCun1 (GCF_003259725.1) 23 Unlocalized Scaffold NW_020799130.1 (17610..29996)

    NW_020799130.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113488248 Neighboring gene gap junction protein alpha 9 Neighboring gene MYC binding protein Neighboring gene UTP11 small subunit processome component Neighboring gene four and a half LIM domains 3 Neighboring gene splicing factor 3a subunit 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020799130 Chromosome 23 Unlocalized Scaffold Reference athCun1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cellular response to amino acid stimulus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to starvation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of TOR signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of autophagy IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Gtr1-Gtr2 GTPase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lysosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ras-related GTP-binding protein C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Athene cunicularia Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference athCun1

    Genomic

    1. NW_020799130.1 Reference athCun1

      Range
      17610..29996
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026863308.1 → XP_026719109.1  ras-related GTP-binding protein C isoform X2

      Conserved Domains (1) summary
      cd11385
      Location:1 → 153
      RagC_like; Rag GTPase, subfamily of Ras-related GTPases, includes Ras-related GTP-binding proteins C and D

    2. XM_026863307.1 → XP_026719108.1  ras-related GTP-binding protein C isoform X1

      UniProtKB/TrEMBL
      A0A663MPC0
      Related
      ENSACUP00000013642.1, ENSACUT00000014551.1
      Conserved Domains (1) summary
      cd11385
      Location:1 → 171
      RagC_like; Rag GTPase, subfamily of Ras-related GTPases, includes Ras-related GTP-binding proteins C and D
    Nucleotide Protein
    Heading Accession and Version

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