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    GCDH glutaryl-CoA dehydrogenase [ Pseudonaja textilis ]

    Gene ID: 113446886, updated on 15-Mar-2024

    Summary

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    Gene symbol
    GCDH
    Gene description
    glutaryl-CoA dehydrogenase
    See related
    Ensembl:ENSPTXG00000018913
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pseudonaja textilis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Pseudonaja
    Orthologs
    human mouse all
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    Genomic context

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    See GCDH in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    100 current EBS10Xv2-PRI (GCF_900518735.1) Unplaced Scaffold NW_020769395.1 (3300971..3316303, complement)

    NW_020769395.1Genomic Context describing neighboring genes Neighboring gene phenylalanyl-tRNA synthetase subunit alpha Neighboring gene synaptonemal complex central element protein 2 Neighboring gene KLF transcription factor 1 Neighboring gene uncharacterized LOC113446932

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020769395 Unplaced Scaffold Reference EBS10Xv2-PRI

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables fatty-acyl-CoA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables flavin adenine dinucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables glutaryl-CoA dehydrogenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid beta-oxidation using acyl-CoA dehydrogenase IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in fatty-acyl-CoA biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glutaryl-CoA dehydrogenase, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pseudonaja textilis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EBS10Xv2-PRI

    Genomic

    1. NW_020769395.1 Reference EBS10Xv2-PRI

      Range
      3300971..3316303 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026716741.1 → XP_026572526.1  glutaryl-CoA dehydrogenase, mitochondrial isoform X2

      Conserved Domains (1) summary
      cd01151
      Location:40 → 426
      GCD; Glutaryl-CoA dehydrogenase

    2. XM_026716739.1 → XP_026572524.1  glutaryl-CoA dehydrogenase, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A670ZXM3
      Related
      ENSPTXP00000027453.1, ENSPTXT00000028290.1
      Conserved Domains (1) summary
      cd01151
      Location:52 → 438
      GCD; Glutaryl-CoA dehydrogenase

    3. XM_026716742.1 → XP_026572527.1  glutaryl-CoA dehydrogenase, mitochondrial isoform X3

    Nucleotide Protein
    Heading Accession and Version

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