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    TNNT1 troponin T1, slow skeletal type [ Notechis scutatus (mainland tiger snake) ]

    Gene ID: 113418522, updated on 15-Mar-2024

    Summary

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    Gene symbol
    TNNT1
    Gene description
    troponin T1, slow skeletal type
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Notechis scutatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Notechis
    Orthologs
    human mouse all
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    Genomic context

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    See TNNT1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    100 current TS10Xv2-PRI (GCF_900518725.1) Unplaced Scaffold NW_020716702.1 (610026..655602)

    NW_020716702.1Genomic Context describing neighboring genes Neighboring gene U1 spliceosomal RNA Neighboring gene fucosyltransferase 2 (H blood group) Neighboring gene protein phosphatase 1 regulatory subunit 12C Neighboring gene EPS8 signaling adaptor L1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020716702 Unplaced Scaffold Reference TS10Xv2-PRI

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables tropomyosin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables troponin T binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of muscle contraction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sarcomere organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in slow-twitch skeletal muscle fiber contraction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of troponin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    troponin T, slow skeletal muscle

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Notechis scutatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference TS10Xv2-PRI

    Genomic

    1. NW_020716702.1 Reference TS10Xv2-PRI

      Range
      610026..655602
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026677426.1 → XP_026533211.1  troponin T, slow skeletal muscle isoform X1

      UniProtKB/TrEMBL
      A0A6J1UQH3

    2. XM_026677427.1 → XP_026533212.1  troponin T, slow skeletal muscle isoform X2

      UniProtKB/TrEMBL
      A0A6J1UQG9

    3. XM_026677428.1 → XP_026533213.1  troponin T, slow skeletal muscle isoform X3

      UniProtKB/TrEMBL
      A0A6J1UXQ8
    Nucleotide Protein
    Heading Accession and Version

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