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    LOC113416541 xin actin-binding repeat-containing protein 2-like [ Notechis scutatus (mainland tiger snake) ]

    Gene ID: 113416541, updated on 23-Oct-2023

    Summary

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    Gene symbol
    LOC113416541
    Gene description
    xin actin-binding repeat-containing protein 2-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Notechis scutatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Notechis
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    Genomic context

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    See LOC113416541 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current TS10Xv2-PRI (GCF_900518725.1) Unplaced Scaffold NW_020716674.1 (13631..123234, complement)

    NW_020716674.1Genomic Context describing neighboring genes Neighboring gene sodium channel protein type 2 subunit alpha-like Neighboring gene sodium channel protein type 1 subunit alpha-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020716674 Unplaced Scaffold Reference TS10Xv2-PRI

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in actin filament organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in focal adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in stress fiber IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    xin actin-binding repeat-containing protein 2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Notechis scutatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference TS10Xv2-PRI

    Genomic

    1. NW_020716674.1 Reference TS10Xv2-PRI

      Range
      13631..123234 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026674487.1 → XP_026530272.1  xin actin-binding repeat-containing protein 2-like

      UniProtKB/TrEMBL
      A0A6J1UH90
    Nucleotide Protein
    Heading Accession and Version

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