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    Hspg2 heparan sulfate proteoglycan 2 [ Urocitellus parryii (Arctic ground squirrel) ]

    Gene ID: 113193175, updated on 15-Mar-2024

    Summary

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    Gene symbol
    Hspg2
    Gene description
    heparan sulfate proteoglycan 2
    See related
    Ensembl:ENSUPAG00010020689
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Urocitellus parryii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Urocitellus
    Orthologs
    human mouse all
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    Genomic context

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    See Hspg2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    103
    Annotation release Status Assembly Chr Location
    100 current ASM342692v1 (GCF_003426925.1) Unplaced Scaffold NW_020540182.1 (223761..313162, complement)

    NW_020540182.1Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 48 Neighboring gene low density lipoprotein receptor class A domain containing 2 Neighboring gene uncharacterized LOC113193224 Neighboring gene proproteinase E

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020540182 Unplaced Scaffold Reference ASM342692v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cell adhesion molecule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell-cell junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    basement membrane-specific heparan sulfate proteoglycan core protein

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Urocitellus parryii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM342692v1

    Genomic

    1. NW_020540182.1 Reference ASM342692v1

      Range
      223761..313162 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026403561.1 → XP_026259346.1  basement membrane-specific heparan sulfate proteoglycan core protein isoform X2

      Conserved Domains (19) summary
      cd05743
      Location:437 → 514
      Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
      cd05754
      Location:1949 → 2034
      Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
      smart00192
      Location:301 → 332
      LDLa; Low-density lipoprotein receptor domain class A
      smart00281
      Location:608 → 732
      LamB; Laminin B domain
      smart00409
      Location:3397 → 3471
      IG; Immunoglobulin
      smart00410
      Location:2235 → 2312
      IG_like; Immunoglobulin like
      cd00054
      Location:4034 → 4063
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd00055
      Location:1181 → 1230
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      cd00110
      Location:4385 → 4544
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cd00112
      Location:344 → 375
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      pfam07679
      Location:3752 → 3834
      I-set; Immunoglobulin I-set domain
      pfam00053
      Location:1298 → 1345
      Laminin_EGF; Laminin EGF domain
      pfam00008
      Location:4290 → 4320
      EGF; EGF-like domain
      pfam00052
      Location:1013 → 1147
      Laminin_B; Laminin B (Domain IV)
      pfam13927
      Location:2809 → 2879
      Ig_3; Immunoglobulin domain
      cd00096
      Location:2732 → 2791
      Ig; Immunoglobulin domain
      cl02507
      Location:80 → 194
      SEA; SEA domain
      cl11960
      Location:3593 → 3659
      Ig; Immunoglobulin domain
      cl28434
      Location:3199 → 3285
      I-set; Immunoglobulin I-set domain

    2. XM_026403567.1 → XP_026259352.1  basement membrane-specific heparan sulfate proteoglycan core protein isoform X8

      Conserved Domains (19) summary
      cd05743
      Location:437 → 514
      Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
      cd05754
      Location:1950 → 2035
      Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
      smart00192
      Location:301 → 332
      LDLa; Low-density lipoprotein receptor domain class A
      smart00281
      Location:608 → 732
      LamB; Laminin B domain
      smart00409
      Location:2431 → 2505
      IG; Immunoglobulin
      smart00410
      Location:3300 → 3374
      IG_like; Immunoglobulin like
      cd00054
      Location:3937 → 3966
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd00055
      Location:1181 → 1230
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      cd00110
      Location:4288 → 4447
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cd00112
      Location:344 → 375
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      pfam07679
      Location:3655 → 3737
      I-set; Immunoglobulin I-set domain
      pfam00053
      Location:1298 → 1345
      Laminin_EGF; Laminin EGF domain
      pfam00008
      Location:4193 → 4223
      EGF; EGF-like domain
      pfam00052
      Location:1013 → 1147
      Laminin_B; Laminin B (Domain IV)
      pfam13927
      Location:2810 → 2880
      Ig_3; Immunoglobulin domain
      cd00096
      Location:2733 → 2792
      Ig; Immunoglobulin domain
      cl02507
      Location:80 → 194
      SEA; SEA domain
      cl11960
      Location:3496 → 3562
      Ig; Immunoglobulin domain
      cl28434
      Location:3102 → 3188
      I-set; Immunoglobulin I-set domain

    3. XM_026403565.1 → XP_026259350.1  basement membrane-specific heparan sulfate proteoglycan core protein isoform X6

      Conserved Domains (19) summary
      cd05743
      Location:437 → 514
      Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
      cd05754
      Location:1950 → 2035
      Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
      smart00192
      Location:301 → 332
      LDLa; Low-density lipoprotein receptor domain class A
      smart00281
      Location:608 → 732
      LamB; Laminin B domain
      smart00409
      Location:3398 → 3472
      IG; Immunoglobulin
      smart00410
      Location:2236 → 2313
      IG_like; Immunoglobulin like
      cd00054
      Location:4029 → 4058
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd00055
      Location:1181 → 1230
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      cd00110
      Location:4380 → 4538
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cd00112
      Location:344 → 375
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      pfam07679
      Location:3753 → 3835
      I-set; Immunoglobulin I-set domain
      pfam00053
      Location:1298 → 1345
      Laminin_EGF; Laminin EGF domain
      pfam00008
      Location:4285 → 4315
      EGF; EGF-like domain
      pfam00052
      Location:1013 → 1147
      Laminin_B; Laminin B (Domain IV)
      pfam13927
      Location:2810 → 2880
      Ig_3; Immunoglobulin domain
      cd00096
      Location:2733 → 2792
      Ig; Immunoglobulin domain
      cl02507
      Location:80 → 194
      SEA; SEA domain
      cl11960
      Location:3594 → 3660
      Ig; Immunoglobulin domain
      cl28434
      Location:3200 → 3286
      I-set; Immunoglobulin I-set domain

    4. XM_026403563.1 → XP_026259348.1  basement membrane-specific heparan sulfate proteoglycan core protein isoform X4

      Conserved Domains (19) summary
      cd05743
      Location:437 → 514
      Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
      cd05754
      Location:1950 → 2035
      Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
      smart00192
      Location:301 → 332
      LDLa; Low-density lipoprotein receptor domain class A
      smart00281
      Location:608 → 732
      LamB; Laminin B domain
      smart00409
      Location:3398 → 3472
      IG; Immunoglobulin
      smart00410
      Location:2236 → 2313
      IG_like; Immunoglobulin like
      cd00054
      Location:4029 → 4058
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd00055
      Location:1181 → 1230
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      cd00110
      Location:4380 → 4539
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cd00112
      Location:344 → 375
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      pfam07679
      Location:3753 → 3835
      I-set; Immunoglobulin I-set domain
      pfam00053
      Location:1298 → 1345
      Laminin_EGF; Laminin EGF domain
      pfam00008
      Location:4285 → 4315
      EGF; EGF-like domain
      pfam00052
      Location:1013 → 1147
      Laminin_B; Laminin B (Domain IV)
      pfam13927
      Location:2810 → 2880
      Ig_3; Immunoglobulin domain
      cd00096
      Location:2733 → 2792
      Ig; Immunoglobulin domain
      cl02507
      Location:80 → 194
      SEA; SEA domain
      cl11960
      Location:3594 → 3660
      Ig; Immunoglobulin domain
      cl28434
      Location:3200 → 3286
      I-set; Immunoglobulin I-set domain

    5. XM_026403562.1 → XP_026259347.1  basement membrane-specific heparan sulfate proteoglycan core protein isoform X3

      Conserved Domains (19) summary
      cd05743
      Location:437 → 514
      Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
      cd05754
      Location:1950 → 2035
      Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
      smart00192
      Location:301 → 332
      LDLa; Low-density lipoprotein receptor domain class A
      smart00281
      Location:608 → 732
      LamB; Laminin B domain
      smart00409
      Location:3398 → 3472
      IG; Immunoglobulin
      smart00410
      Location:2236 → 2313
      IG_like; Immunoglobulin like
      cd00054
      Location:4035 → 4064
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd00055
      Location:1181 → 1230
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      cd00110
      Location:4386 → 4544
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cd00112
      Location:344 → 375
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      pfam07679
      Location:3753 → 3835
      I-set; Immunoglobulin I-set domain
      pfam00053
      Location:1298 → 1345
      Laminin_EGF; Laminin EGF domain
      pfam00008
      Location:4291 → 4321
      EGF; EGF-like domain
      pfam00052
      Location:1013 → 1147
      Laminin_B; Laminin B (Domain IV)
      pfam13927
      Location:2810 → 2880
      Ig_3; Immunoglobulin domain
      cd00096
      Location:2733 → 2792
      Ig; Immunoglobulin domain
      cl02507
      Location:80 → 194
      SEA; SEA domain
      cl11960
      Location:3594 → 3660
      Ig; Immunoglobulin domain
      cl28434
      Location:3200 → 3286
      I-set; Immunoglobulin I-set domain

    6. XM_026403560.1 → XP_026259345.1  basement membrane-specific heparan sulfate proteoglycan core protein isoform X1

      Conserved Domains (19) summary
      cd05743
      Location:437 → 514
      Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
      cd05754
      Location:1950 → 2035
      Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
      smart00192
      Location:301 → 332
      LDLa; Low-density lipoprotein receptor domain class A
      smart00281
      Location:608 → 732
      LamB; Laminin B domain
      smart00409
      Location:3398 → 3472
      IG; Immunoglobulin
      smart00410
      Location:2236 → 2313
      IG_like; Immunoglobulin like
      cd00054
      Location:4035 → 4064
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd00055
      Location:1181 → 1230
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      cd00110
      Location:4386 → 4545
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cd00112
      Location:344 → 375
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      pfam07679
      Location:3753 → 3835
      I-set; Immunoglobulin I-set domain
      pfam00053
      Location:1298 → 1345
      Laminin_EGF; Laminin EGF domain
      pfam00008
      Location:4291 → 4321
      EGF; EGF-like domain
      pfam00052
      Location:1013 → 1147
      Laminin_B; Laminin B (Domain IV)
      pfam13927
      Location:2810 → 2880
      Ig_3; Immunoglobulin domain
      cd00096
      Location:2733 → 2792
      Ig; Immunoglobulin domain
      cl02507
      Location:80 → 194
      SEA; SEA domain
      cl11960
      Location:3594 → 3660
      Ig; Immunoglobulin domain
      cl28434
      Location:3200 → 3286
      I-set; Immunoglobulin I-set domain

    7. XM_026403572.1 → XP_026259357.1  basement membrane-specific heparan sulfate proteoglycan core protein isoform X12

      Conserved Domains (19) summary
      cd05743
      Location:420 → 497
      Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
      cd05754
      Location:1769 → 1854
      Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
      smart00192
      Location:284 → 315
      LDLa; Low-density lipoprotein receptor domain class A
      smart00281
      Location:1390 → 1515
      LamB; Laminin B domain
      smart00409
      Location:2732 → 2809
      IG; Immunoglobulin
      smart00410
      Location:3217 → 3291
      IG_like; Immunoglobulin like
      cd00054
      Location:3848 → 3877
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd00055
      Location:1157 → 1206
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      cd00110
      Location:4199 → 4357
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cd00112
      Location:327 → 358
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      pfam07679
      Location:3572 → 3654
      I-set; Immunoglobulin I-set domain
      pfam00053
      Location:1274 → 1321
      Laminin_EGF; Laminin EGF domain
      pfam00008
      Location:4104 → 4134
      EGF; EGF-like domain
      pfam00052
      Location:989 → 1123
      Laminin_B; Laminin B (Domain IV)
      pfam13927
      Location:2629 → 2699
      Ig_3; Immunoglobulin domain
      cd00096
      Location:2552 → 2611
      Ig; Immunoglobulin domain
      cl02507
      Location:80 → 194
      SEA; SEA domain
      cl11960
      Location:3413 → 3479
      Ig; Immunoglobulin domain
      cl28434
      Location:3019 → 3105
      I-set; Immunoglobulin I-set domain

    8. XM_026403566.1 → XP_026259351.1  basement membrane-specific heparan sulfate proteoglycan core protein isoform X7

      Conserved Domains (19) summary
      cd05743
      Location:420 → 497
      Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
      cd05754
      Location:1933 → 2018
      Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
      smart00192
      Location:284 → 315
      LDLa; Low-density lipoprotein receptor domain class A
      smart00281
      Location:591 → 715
      LamB; Laminin B domain
      smart00409
      Location:3381 → 3455
      IG; Immunoglobulin
      smart00410
      Location:2414 → 2488
      IG_like; Immunoglobulin like
      cd00054
      Location:4018 → 4047
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd00055
      Location:1164 → 1213
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      cd00110
      Location:4369 → 4528
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cd00112
      Location:327 → 358
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      pfam07679
      Location:3736 → 3818
      I-set; Immunoglobulin I-set domain
      pfam00053
      Location:1281 → 1328
      Laminin_EGF; Laminin EGF domain
      pfam00008
      Location:4274 → 4304
      EGF; EGF-like domain
      pfam00052
      Location:996 → 1130
      Laminin_B; Laminin B (Domain IV)
      pfam13927
      Location:2793 → 2863
      Ig_3; Immunoglobulin domain
      cd00096
      Location:2716 → 2775
      Ig; Immunoglobulin domain
      cl02507
      Location:80 → 194
      SEA; SEA domain
      cl11960
      Location:3577 → 3643
      Ig; Immunoglobulin domain
      cl28434
      Location:3183 → 3269
      I-set; Immunoglobulin I-set domain

    9. XM_026403564.1 → XP_026259349.1  basement membrane-specific heparan sulfate proteoglycan core protein isoform X5

      Conserved Domains (19) summary
      cd05743
      Location:437 → 514
      Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
      cd05754
      Location:1943 → 2028
      Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
      smart00192
      Location:301 → 332
      LDLa; Low-density lipoprotein receptor domain class A
      smart00281
      Location:608 → 732
      LamB; Laminin B domain
      smart00409
      Location:2229 → 2306
      IG; Immunoglobulin
      smart00410
      Location:3391 → 3465
      IG_like; Immunoglobulin like
      cd00054
      Location:4028 → 4057
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd00055
      Location:1174 → 1223
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      cd00110
      Location:4379 → 4538
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cd00112
      Location:344 → 375
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      pfam07679
      Location:3746 → 3828
      I-set; Immunoglobulin I-set domain
      pfam00053
      Location:1291 → 1338
      Laminin_EGF; Laminin EGF domain
      pfam00008
      Location:4284 → 4314
      EGF; EGF-like domain
      pfam00052
      Location:1006 → 1140
      Laminin_B; Laminin B (Domain IV)
      pfam13927
      Location:2803 → 2873
      Ig_3; Immunoglobulin domain
      cd00096
      Location:2726 → 2785
      Ig; Immunoglobulin domain
      cl02507
      Location:80 → 194
      SEA; SEA domain
      cl11960
      Location:3587 → 3653
      Ig; Immunoglobulin domain
      cl28434
      Location:3193 → 3279
      I-set; Immunoglobulin I-set domain

    10. XM_026403568.1 → XP_026259353.1  basement membrane-specific heparan sulfate proteoglycan core protein isoform X9

      Conserved Domains (19) summary
      cd05743
      Location:437 → 514
      Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
      cd05754
      Location:1794 → 1879
      Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
      smart00192
      Location:301 → 332
      LDLa; Low-density lipoprotein receptor domain class A
      smart00281
      Location:1414 → 1539
      LamB; Laminin B domain
      smart00409
      Location:3242 → 3316
      IG; Immunoglobulin
      smart00410
      Location:2275 → 2349
      IG_like; Immunoglobulin like
      cd00054
      Location:3879 → 3908
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd00055
      Location:1181 → 1230
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      cd00110
      Location:4230 → 4389
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cd00112
      Location:344 → 375
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      pfam07679
      Location:3597 → 3679
      I-set; Immunoglobulin I-set domain
      pfam00053
      Location:1298 → 1345
      Laminin_EGF; Laminin EGF domain
      pfam00008
      Location:4135 → 4165
      EGF; EGF-like domain
      pfam00052
      Location:1013 → 1147
      Laminin_B; Laminin B (Domain IV)
      pfam13927
      Location:2654 → 2724
      Ig_3; Immunoglobulin domain
      cd00096
      Location:2577 → 2636
      Ig; Immunoglobulin domain
      cl02507
      Location:80 → 194
      SEA; SEA domain
      cl11960
      Location:3438 → 3504
      Ig; Immunoglobulin domain
      cl28434
      Location:3044 → 3130
      I-set; Immunoglobulin I-set domain

    11. XM_026403570.1 → XP_026259355.1  basement membrane-specific heparan sulfate proteoglycan core protein isoform X11

      Conserved Domains (19) summary
      cd05743
      Location:420 → 497
      Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
      cd05754
      Location:1769 → 1854
      Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
      smart00192
      Location:284 → 315
      LDLa; Low-density lipoprotein receptor domain class A
      smart00281
      Location:1390 → 1515
      LamB; Laminin B domain
      smart00409
      Location:2732 → 2809
      IG; Immunoglobulin
      smart00410
      Location:3217 → 3291
      IG_like; Immunoglobulin like
      cd00054
      Location:3854 → 3883
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd00055
      Location:1157 → 1206
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      cd00110
      Location:4205 → 4364
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cd00112
      Location:327 → 358
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      pfam07679
      Location:3572 → 3654
      I-set; Immunoglobulin I-set domain
      pfam00053
      Location:1274 → 1321
      Laminin_EGF; Laminin EGF domain
      pfam00008
      Location:4110 → 4140
      EGF; EGF-like domain
      pfam00052
      Location:989 → 1123
      Laminin_B; Laminin B (Domain IV)
      pfam13927
      Location:2629 → 2699
      Ig_3; Immunoglobulin domain
      cd00096
      Location:2552 → 2611
      Ig; Immunoglobulin domain
      cl02507
      Location:80 → 194
      SEA; SEA domain
      cl11960
      Location:3413 → 3479
      Ig; Immunoglobulin domain
      cl28434
      Location:3019 → 3105
      I-set; Immunoglobulin I-set domain

    12. XM_026403573.1 → XP_026259358.1  basement membrane-specific heparan sulfate proteoglycan core protein isoform X13

      Related
      ENSUPAT00010029885.1
      Conserved Domains (19) summary
      cd05743
      Location:420 → 497
      Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
      cd05754
      Location:1770 → 1855
      Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
      smart00192
      Location:284 → 315
      LDLa; Low-density lipoprotein receptor domain class A
      smart00281
      Location:1390 → 1515
      LamB; Laminin B domain
      smart00409
      Location:2733 → 2810
      IG; Immunoglobulin
      smart00410
      Location:3218 → 3292
      IG_like; Immunoglobulin like
      cd00054
      Location:3849 → 3878
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd00055
      Location:1157 → 1206
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      cd00110
      Location:4200 → 4359
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cd00112
      Location:327 → 358
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      pfam07679
      Location:3573 → 3655
      I-set; Immunoglobulin I-set domain
      pfam00053
      Location:1274 → 1321
      Laminin_EGF; Laminin EGF domain
      pfam00008
      Location:4105 → 4135
      EGF; EGF-like domain
      pfam00052
      Location:989 → 1123
      Laminin_B; Laminin B (Domain IV)
      pfam13927
      Location:2630 → 2700
      Ig_3; Immunoglobulin domain
      cd00096
      Location:2553 → 2612
      Ig; Immunoglobulin domain
      cl02507
      Location:80 → 194
      SEA; SEA domain
      cl11960
      Location:3414 → 3480
      Ig; Immunoglobulin domain
      cl28434
      Location:3020 → 3106
      I-set; Immunoglobulin I-set domain

    13. XM_026403569.1 → XP_026259354.1  basement membrane-specific heparan sulfate proteoglycan core protein isoform X10

      Conserved Domains (19) summary
      cd05743
      Location:420 → 497
      Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
      cd05754
      Location:1770 → 1855
      Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
      smart00192
      Location:284 → 315
      LDLa; Low-density lipoprotein receptor domain class A
      smart00281
      Location:1390 → 1515
      LamB; Laminin B domain
      smart00409
      Location:2733 → 2810
      IG; Immunoglobulin
      smart00410
      Location:3218 → 3292
      IG_like; Immunoglobulin like
      cd00054
      Location:3855 → 3884
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd00055
      Location:1157 → 1206
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      cd00110
      Location:4206 → 4365
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cd00112
      Location:327 → 358
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      pfam07679
      Location:3573 → 3655
      I-set; Immunoglobulin I-set domain
      pfam00053
      Location:1274 → 1321
      Laminin_EGF; Laminin EGF domain
      pfam00008
      Location:4111 → 4141
      EGF; EGF-like domain
      pfam00052
      Location:989 → 1123
      Laminin_B; Laminin B (Domain IV)
      pfam13927
      Location:2630 → 2700
      Ig_3; Immunoglobulin domain
      cd00096
      Location:2553 → 2612
      Ig; Immunoglobulin domain
      cl02507
      Location:80 → 194
      SEA; SEA domain
      cl11960
      Location:3414 → 3480
      Ig; Immunoglobulin domain
      cl28434
      Location:3020 → 3106
      I-set; Immunoglobulin I-set domain
    Nucleotide Protein
    Heading Accession and Version

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