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    ppm1aa protein phosphatase, Mg2+/Mn2+ dependent, 1Aa [ Mastacembelus armatus (zig-zag eel) ]

    Gene ID: 113133994, updated on 15-Mar-2024

    Summary

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    Gene symbol
    ppm1aa
    Gene description
    protein phosphatase, Mg2+/Mn2+ dependent, 1Aa
    See related
    Ensembl:ENSMAMG00000001836
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mastacembelus armatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Mastacembelidae; Mastacembelus
    Also known as
    ppm1a
    Orthologs
    human zebrafish all
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    Genomic context

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    See ppm1aa in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    101 current fMasArm1.2 (GCF_900324485.2) 22 NC_046654.1 (10384956..10449543, complement)
    100 previous assembly fMasArm1.1 (GCF_900324485.1) Unplaced Scaffold NW_020535848.1 (10384966..10449543, complement)

    Chromosome 22 - NC_046654.1Genomic Context describing neighboring genes Neighboring gene tRNA methyltransferase 5 Neighboring gene MNAT1 component of CDK activating kinase Neighboring gene SIX homeobox 4a Neighboring gene SIX homeobox 1 Neighboring gene SIX homeobox 6a Neighboring gene dehydrogenase/reductase (SDR family) member 7 Neighboring gene pecanex 4 Neighboring gene leucine rich repeat containing 9

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables manganese ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein serine/threonine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of canonical NF-kappaB signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of canonical NF-kappaB signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein phosphatase 1A
    Names
    protein phosphatase, Mg2+/Mn2+ dependent 1A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Mastacembelus armatus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fMasArm1.2 Primary Assembly

    Genomic

    1. NC_046654.1 Reference fMasArm1.2 Primary Assembly

      Range
      10384956..10449543 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026313163.1 → XP_026168948.1  protein phosphatase 1A isoform X1

      Conserved Domains (2) summary
      cd00143
      Location:23 → 292
      PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...
      pfam07830
      Location:286 → 362
      PP2C_C; Protein serine/threonine phosphatase 2C, C-terminal domain

    2. XM_026313248.1 → XP_026169033.1  protein phosphatase 1A isoform X2

      UniProtKB/TrEMBL
      A0A3Q3RIP0
      Related
      ENSMAMP00000002610.1, ENSMAMT00000002663.2
      Conserved Domains (2) summary
      cd00143
      Location:23 → 292
      PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...
      pfam07830
      Location:286 → 362
      PP2C_C; Protein serine/threonine phosphatase 2C, C-terminal domain

    3. XM_026313331.1 → XP_026169116.1  protein phosphatase 1A isoform X3

      UniProtKB/TrEMBL
      A0A3Q3RIS0
      Related
      ENSMAMP00000002630.1, ENSMAMT00000002683.2
      Conserved Domains (2) summary
      cd00143
      Location:23 → 292
      PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...
      pfam07830
      Location:286 → 362
      PP2C_C; Protein serine/threonine phosphatase 2C, C-terminal domain

    RNA

    1. XR_003296052.2 RNA Sequence

    2. XR_003296053.1 RNA Sequence

    3. XR_003296051.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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