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    pdgfc platelet derived growth factor c [ Astatotilapia calliptera (eastern happy) ]

    Gene ID: 113030883, updated on 15-Mar-2024

    Summary

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    Gene symbol
    pdgfc
    Gene description
    platelet derived growth factor c
    See related
    Ensembl:ENSACLG00000011276
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Astatotilapia calliptera
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Astatotilapia
    Orthologs
    human zebrafish all
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    Genomic context

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    See pdgfc in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current fAstCal1.2 (GCF_900246225.1) 2 NC_039303.1 (5963081..6011639, complement)

    Chromosome 2 - NC_039303.1Genomic Context describing neighboring genes Neighboring gene aspartylglucosaminidase Neighboring gene nei-like DNA glycosylase 3 Neighboring gene glycine receptor, beta b Neighboring gene glutamate receptor, ionotropic, AMPA 2b

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_039303.1 Chromosome 2 Reference fAstCal1.2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables growth factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables platelet-derived growth factor receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in platelet-derived growth factor receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of ERK1 and ERK2 cascade IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of MAP kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of cell population proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of protein autophosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    platelet-derived growth factor C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Astatotilapia calliptera Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fAstCal1.2 Primary Assembly

    Genomic

    1. NC_039303.1 Reference fAstCal1.2 Primary Assembly

      Range
      5963081..6011639 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026182670.1 → XP_026038455.1  platelet-derived growth factor C

      UniProtKB/TrEMBL
      A0A3P8PHL7
      Related
      ENSACLP00000016535.1, ENSACLT00000016923.1
    Nucleotide Protein
    Heading Accession and Version

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