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    GSPATT00003213001 uncharacterized protein [ Paramecium tetraurelia ]

    Gene ID: 5041427, updated on 23-Nov-2023

    Summary

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    Gene symbol
    GSPATT00003213001
    Gene description
    uncharacterized protein
    Locus tag
    GSPATT00003213001
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Paramecium tetraurelia (strain: Stock d4-2)
    Lineage
    Eukaryota; Sar; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium
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    Genomic context

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    See GSPATT00003213001 in Genome Data Viewer
    Location:
    chromosome: undetermined
    Exon count:
    7

    NW_001799619.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_001799619.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia. Aury JM, et al. Nature, 2006 Nov 9. PMID 17086204
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables succinate-CoA ligase (ADP-forming) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables succinate-CoA ligase (GDP-forming) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tricarboxylic acid cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of succinate-CoA ligase complex (ADP-forming) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001799619.1 Reference assembly

      Range
      467669..468809
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001455605.2 → XP_001455642.1  uncharacterized protein GSPATT00003213001 [Paramecium tetraurelia]

      See identical proteins and their annotated locations for XP_001455642.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0DYX8
      Conserved Domains (3) summary
      PTZ00187
      Location:1 → 308
      PTZ00187; succinyl-CoA synthetase alpha subunit; Provisional
      pfam02629
      Location:21 → 114
      CoA_binding; CoA binding domain
      cl22543
      Location:246 → 287
      Ligase_CoA; CoA-ligase
    Nucleotide Protein
    Heading Accession and Version

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