U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    An17g01580 uncharacterized protein [ Aspergillus niger ]

    Gene ID: 4989481, updated on 31-Oct-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    An17g01580
    Gene description
    uncharacterized protein
    Locus tag
    An17g01580
    See related
    FungiDB:An17g01580; VEuPathDB:An17g01580
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Aspergillus niger
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Circumdati
    Orthologs
    Aspergillus fumigatus all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See An17g01580 in Genome Data Viewer
    Location:
    chromosome: V, map: unlocalized, clone: An17
    Exon count:
    5

    NT_166532.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NT_166532.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88. Pel HJ, et al. Nat Biotechnol, 2007 Feb. PMID 17259976
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sexual reproduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Ste12p-Dig1p-Dig2p complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of Tec1p-Ste12p-Dig1p complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    XP_001398387.1
    • Remark: S. cerevisiae Ste12p plays a key role in coupling signal transduction through MAP kinase modules to cell-specific or morphogenesis-specific gene expression required for mating and pseudohyphal (PH)/filamentous growth (FG). Ste12p homologues in the pathogenic yeasts Candida albicans and Filobasidiela neoformans apparently play similar roles during dimorphic transitions.;
      Title: strong similarity to homeodomain DNA-binding transcription factor ste12 - Aspergillus nidulans;
      See PMID 10792717

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_166532.1 Reference assembly

      Range
      375006..377466 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001398350.3 → XP_001398387.1  uncharacterized protein An17g01580 [Aspergillus niger]

      See identical proteins and their annotated locations for XP_001398387.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A370BYA7, A0A505IQ28, A2R9I8, G3Y4M8
      Conserved Domains (4) summary
      COG5048
      Location:566 → 624
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:574 → 596
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam02200
      Location:57 → 165
      STE; STE like transcription factor
      pfam13465
      Location:588 → 613
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials