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Links from Protein

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    LOC112933704 histone H1oo [ Vulpes vulpes (red fox) ]

    Gene ID: 112933704, updated on 15-Mar-2024

    Summary

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    Gene symbol
    LOC112933704
    Gene description
    histone H1oo
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vulpes vulpes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
    Orthologs
    human mouse all
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    Genomic context

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    See LOC112933704 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current VulVul2.2 (GCF_003160815.1) Unplaced Scaffold NW_020356565.1 (1151822..1160935, complement)

    NW_020356565.1Genomic Context describing neighboring genes Neighboring gene transmembrane and coiled-coil domain family 1 Neighboring gene U6 spliceosomal RNA Neighboring gene plexin D1 Neighboring gene intraflagellar transport 122 Neighboring gene rhodopsin Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020356565 Unplaced Scaffold Reference VulVul2.2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in nucleosome assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of nucleosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: histone H1oo

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Vulpes vulpes Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference VulVul2.2 Primary Assembly

    Genomic

    1. NW_020356565.1 Reference VulVul2.2 Primary Assembly

      Range
      1151822..1160935 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026016918.1 → XP_025872703.1  LOW QUALITY PROTEIN: histone H1oo

      UniProtKB/TrEMBL
      A0A3Q7TSA9
      Conserved Domains (2) summary
      cd00073
      Location:43 → 133
      H15; linker histone 1 and histone 5 domains; the basic subunit of chromatin is the nucleosome, consisting of an octamer of core histones, two full turns of DNA, a linker histone (H1 or H5) and a variable length of linker DNA; H1/H5 are chromatin-associated ...
      cl28310
      Location:132 → 254
      Rho; Transcription termination factor Rho [Transcription]
    Nucleotide Protein Strain
    Heading Accession and Version

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