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    LOC112899303 homeobox-leucine zipper protein ROC2 [ Panicum hallii ]

    Gene ID: 112899303, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC112899303
    Gene description
    homeobox-leucine zipper protein ROC2
    Locus tag
    PAHAL_7G299500
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Panicum hallii
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum; Panicum sect. Panicum
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    Genomic context

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    See LOC112899303 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    100 current PHallii_v3.1 (GCF_002211085.1) 7 NC_038048.1 (44752055..44758054, complement)

    Chromosome 7 - NC_038048.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112901549 Neighboring gene uncharacterized LOC112899304 Neighboring gene ABC transporter I family member 1 Neighboring gene vascular-related unknown protein 4-like Neighboring gene uncharacterized LOC112900044

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_038048.1 Chromosome 7 Reference PHallii_v3.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables lipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    homeobox-leucine zipper protein ROC2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Panicum hallii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference PHallii_v3.1

    Genomic

    1. NC_038048.1 Reference PHallii_v3.1

      Range
      44752055..44758054 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025967720.1 → XP_025823505.1  homeobox-leucine zipper protein ROC2

      UniProtKB/TrEMBL
      A0A2S3IAL0, A0A2T7D0A6
      Conserved Domains (2) summary
      cd08875
      Location:297 → 522
      START_ArGLABRA2_like; C-terminal lipid-binding START domain of the Arabidopsis homeobox protein GLABRA 2 and related proteins
      pfam00046
      Location:107 → 160
      Homeobox; Homeobox domain
    Nucleotide Protein Strain
    Heading Accession and Version

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