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    PDHX pyruvate dehydrogenase complex component X [ Puma concolor (puma) ]

    Gene ID: 112865023, updated on 15-Mar-2024

    Summary

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    Gene symbol
    PDHX
    Gene description
    pyruvate dehydrogenase complex component X
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Puma concolor
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
    Orthologs
    human mouse all
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    Genomic context

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    See PDHX in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    100 current PumCon1.0 (GCF_003327715.1) Unplaced Scaffold NW_020339798.1 (14944601..15015519, complement)

    NW_020339798.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 1 member 2 Neighboring gene CD44 molecule (IN blood group) Neighboring gene APAF1 interacting protein Neighboring gene ETS homologous factor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020339798 Unplaced Scaffold Reference PumCon1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables acyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in acetyl-CoA biosynthetic process from pyruvate IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of pyruvate dehydrogenase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pyruvate dehydrogenase protein X component, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Puma concolor Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference PumCon1.0 Primary Assembly

    Genomic

    1. NW_020339798.1 Reference PumCon1.0 Primary Assembly

      Range
      14944601..15015519 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025928071.1 → XP_025783856.1  pyruvate dehydrogenase protein X component, mitochondrial isoform X3

      UniProtKB/TrEMBL
      A0A6P6I6S1
      Conserved Domains (2) summary
      pfam00198
      Location:109 → 273
      2-oxoacid_dh; 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
      cl27364
      Location:56 → 114
      Transketolase_C; Transketolase, C-terminal domain

    2. XM_025928069.1 → XP_025783854.1  pyruvate dehydrogenase protein X component, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A6P6I7T0
      Conserved Domains (1) summary
      cl27351
      Location:58 → 500
      E3_binding; e3 binding domain

    3. XM_025928070.1 → XP_025783855.1  pyruvate dehydrogenase protein X component, mitochondrial isoform X2

      UniProtKB/TrEMBL
      A0A6P6I6X7
      Conserved Domains (1) summary
      cl27351
      Location:1 → 440
      E3_binding; e3 binding domain
    Nucleotide Protein
    Heading Accession and Version

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