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    LOC112520373 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1-like [ Cynara cardunculus subsp. cardunculus ]

    Gene ID: 112520373, updated on 28-Jun-2024

    Summary

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    Gene symbol
    LOC112520373
    Gene description
    5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1-like
    Locus tag
    Ccrd_021662
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cynara cardunculus subsp. cardunculus (sub-species: cardunculus)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara
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    Genomic context

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    See LOC112520373 in Genome Data Viewer
    Location:
    chromosome: LG 10
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current CcrdV1 (GCF_001531365.1) LG 10 NC_037537.1 (24788699..24795936)

    Chromosome LG 10 - NC_037537.1Genomic Context describing neighboring genes Neighboring gene arogenate dehydratase/prephenate dehydratase 6, chloroplastic-like Neighboring gene arogenate dehydratase/prephenate dehydratase 6, chloroplastic-like Neighboring gene probable 2-carboxy-D-arabinitol-1-phosphatase Neighboring gene stress-response A/B barrel domain-containing protein At5g22580

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037537.1 Chromosome LG 10 Reference CcrdV1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables methylthioadenosine nucleosidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in L-methionine salvage from methylthioadenosine IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nucleoside metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1-like
    Names
    Nucleoside phosphorylase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cynara cardunculus subsp. cardunculus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CcrdV1

    Genomic

    1. NC_037537.1 Reference CcrdV1

      Range
      24788699..24795936
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025128744.1 → XP_024984512.1  5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1-like

      UniProtKB/TrEMBL
      A0A103Y064
      Conserved Domains (1) summary
      PLN02584
      Location:11 → 254
      PLN02584; 5'-methylthioadenosine nucleosidase
    Nucleotide Protein
    Heading Accession and Version

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