U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC7462035 pentatricopeptide repeat-containing protein At4g14190, chloroplastic [ Populus trichocarpa (black cottonwood) ]

    Gene ID: 7462035, updated on 23-Nov-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC7462035
    Gene description
    pentatricopeptide repeat-containing protein At4g14190, chloroplastic
    Locus tag
    POPTR_014G149500v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Populus trichocarpa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC7462035 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    102 current P.trichocarpa_v4.1 (GCF_000002775.5) 14 NC_037298.2 (10291811..10293843, complement)
    101 previous assembly Pop_tri_v3 (GCF_000002775.4) 14 NC_037298.1 (11444469..11446527, complement)

    Chromosome 14 - NC_037298.2Genomic Context describing neighboring genes Neighboring gene cysteine proteinase inhibitor B Neighboring gene peptidyl-prolyl cis-trans isomerase FKBP62 Neighboring gene importin beta-like SAD2 Neighboring gene probable pectinesterase/pectinesterase inhibitor 35

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    pentatricopeptide repeat-containing protein At4g14190, chloroplastic

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P.trichocarpa_v4.1 Primary Assembly

    Genomic

    1. NC_037298.2 Reference P.trichocarpa_v4.1 Primary Assembly

      Range
      10291811..10293843 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024584447.2 → XP_024440215.1  pentatricopeptide repeat-containing protein At4g14190, chloroplastic

      UniProtKB/TrEMBL
      A0A2K1XW21
      Conserved Domains (3) summary
      TIGR00756
      Location:199 → 231
      PPR; pentatricopeptide repeat domain (PPR motif)
      sd00004
      Location:164 → 191
      PPR; PPR repeat [structural motif]
      pfam13041
      Location:165 → 207
      PPR_2; PPR repeat family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials