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Links from Protein

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    An02g12040 uncharacterized protein [ Aspergillus niger ]

    Gene ID: 4979741, updated on 31-Oct-2024

    Summary

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    Gene symbol
    An02g12040
    Gene description
    uncharacterized protein
    Locus tag
    An02g12040
    See related
    FungiDB:An02g12040; VEuPathDB:An02g12040
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Aspergillus niger
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Circumdati
    Orthologs
    Aspergillus fumigatus all
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    Genomic context

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    See An02g12040 in Genome Data Viewer
    Location:
    chromosome: IV, map: unlocalized, clone: An02
    Exon count:
    1

    NT_166519.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NT_166519.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88. Pel HJ, et al. Nat Biotechnol, 2007 Feb. PMID 17259976
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP-dependent chromatin remodeler activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    XP_001400332.1
    • Phenotype: disruption of the fun30 gene in S. cerevisiae surprisingly resulted in increased resistance to UV irradiation.;
      Remark: synonyms for fun30 of S. cerevisiae are YAL019W or YAL001.;
      Similarity: the predicted ORF shows strong similarity to several helicases from different species.;
      Title: strong similarity to helicase Fun30 -Saccharomyces cerevisiae;
      nucleus;
      See PMID 10454593;
      See PMID 8144453

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_166519.1 Reference assembly

      Range
      2933512..2936883 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001400295.1 → XP_001400332.1  uncharacterized protein An02g12040 [Aspergillus niger]

      See identical proteins and their annotated locations for XP_001400332.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A254TQV3, A0A319ALH0, A0A370CBM9, A2QES1, G3Y1W9
      Conserved Domains (2) summary
      COG0553
      Location:536 → 1093
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cl27109
      Location:92 → 205
      Herpes_UL49_2; Herpesvirus UL49 tegument protein
    Nucleotide Protein
    Heading Accession and Version

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