U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC111886142 putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 [ Lactuca sativa (garden lettuce) ]

    Gene ID: 111886142, updated on 10-Oct-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC111886142
    Gene description
    putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5
    Locus tag
    LSAT_V11C900489230
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lactuca sativa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC111886142 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2022_12 current Lsat_Salinas_v11 (GCF_002870075.4) 9 NC_056631.2 (144713080..144721783, complement)
    101 previous assembly Lsat_Salinas_v7 (GCF_002870075.2) 9 NC_056631.1 (124123755..124132303, complement)

    Chromosome 9 - NC_056631.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111886146 Neighboring gene purple acid phosphatase 2 Neighboring gene probable methyltransferase PMT26 Neighboring gene DNA polymerase lambda

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glycosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in xylan biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_002870075.4-RS_2023_1

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Lsat_Salinas_v11 Primary Assembly

    Genomic

    1. NC_056631.2 Reference Lsat_Salinas_v11 Primary Assembly

      Range
      144713080..144721783 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023882368.2 → XP_023738136.1  putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5

      UniProtKB/TrEMBL
      A0A9R1WSK7
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases