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    LOC111803403 fructokinase-like 2, chloroplastic [ Cucurbita pepo subsp. pepo (vegetable marrow) ]

    Gene ID: 111803403, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC111803403
    Gene description
    fructokinase-like 2, chloroplastic
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucurbita pepo subsp. pepo (sub-species: pepo)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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    Genomic context

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    See LOC111803403 in Genome Data Viewer
    Location:
    chromosome: LG10
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current ASM280686v2 (GCF_002806865.1) LG10 NC_036647.1 (8535346..8540225)

    Chromosome LG10 - NC_036647.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S25-like Neighboring gene DNA-dependent metalloprotease WSS1-like Neighboring gene serine/threonine-protein kinase Nek6-like Neighboring gene zinc finger A20 and AN1 domain-containing stress-associated protein 8-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_036647.1 Chromosome LG10 Reference ASM280686v2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in chloroplast organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in etioplast organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in plastid transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast nucleoid IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    fructokinase-like 2, chloroplastic

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucurbita pepo subsp. pepo Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM280686v2 Primary Assembly

    Genomic

    1. NC_036647.1 Reference ASM280686v2 Primary Assembly

      Range
      8535346..8540225
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023687781.1 → XP_023543549.1  fructokinase-like 2, chloroplastic

      Conserved Domains (1) summary
      PLN02967
      Location:6 → 574
      PLN02967; kinase
    Nucleotide Protein
    Heading Accession and Version

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