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    LOC111796146 uncharacterized LOC111796146 [ Cucurbita pepo subsp. pepo (vegetable marrow) ]

    Gene ID: 111796146, updated on 18-Sep-2024

    Summary

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    Gene symbol
    LOC111796146
    Gene description
    uncharacterized LOC111796146
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucurbita pepo subsp. pepo (sub-species: pepo)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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    Genomic context

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    See LOC111796146 in Genome Data Viewer
    Location:
    chromosome: LG05
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current ASM280686v2 (GCF_002806865.1) LG05 NC_036642.1 (2776861..2779002)

    Chromosome LG05 - NC_036642.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase KEG-like Neighboring gene protein CLT1, chloroplastic Neighboring gene uncharacterized LOC111795401 Neighboring gene protein LATERAL ROOT PRIMORDIUM 1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_036642.1 Chromosome LG05 Reference ASM280686v2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phospholipase A2 activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in arachidonate secretion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in phospholipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC111796146

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucurbita pepo subsp. pepo Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM280686v2 Primary Assembly

    Genomic

    1. NC_036642.1 Reference ASM280686v2 Primary Assembly

      Range
      2776861..2779002
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023678858.1 → XP_023534626.1  uncharacterized protein LOC111796146

      Conserved Domains (1) summary
      cl05417
      Location:190 → 302
      PLA2_like; Phospholipase A2, a super-family of secretory and cytosolic enzymes; the latter are either Ca dependent or Ca independent. PLA2 cleaves the sn-2 position of the glycerol backbone of phospholipids (PC or phosphatidylethanolamine), usually in a ...
    Nucleotide Protein
    Heading Accession and Version

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