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    LOC111787643 RING-H2 finger protein ATL8-like [ Cucurbita pepo subsp. pepo (vegetable marrow) ]

    Gene ID: 111787643, updated on 1-Jun-2019

    Summary

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    Gene symbol
    LOC111787643
    Gene description
    RING-H2 finger protein ATL8-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucurbita pepo subsp. pepo (sub-species: pepo)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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    Genomic context

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    See LOC111787643 in Genome Data Viewer
    Location:
    chromosome: LG02
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    100 current ASM280686v2 (GCF_002806865.1) LG02 NC_036639.1 (122444..123527, complement)

    Chromosome LG02 - NC_036639.1Genomic Context describing neighboring genes Neighboring gene protein PLASTID MOVEMENT IMPAIRED 1-like Neighboring gene protein MULTIPLE CHLOROPLAST DIVISION SITE 1 Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic Neighboring gene uncharacterized LOC111785280

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_036639.1 Chromosome LG02 Reference ASM280686v2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    RING-H2 finger protein ATL8-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucurbita pepo subsp. pepo Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM280686v2 Primary Assembly

    Genomic

    1. NC_036639.1 Reference ASM280686v2 Primary Assembly

      Range
      122444..123527 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023667661.1 → XP_023523429.1  RING-H2 finger protein ATL8-like

      Conserved Domains (1) summary
      cd16454
      Location:102 → 145
      RING-H2_PA-TM-RING; RING finger, H2 subclass, found in the PA-TM-RING ubiquitin ligase family
    Nucleotide Protein
    Heading Accession and Version

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